RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SLC25A37Q9NYZ2 338 aa15.69■□□□□ 0.1
TPM4-206ENST00000587201 SLAMF8Q9P0V8 285 aa15.69■□□□□ 0.1
TPM4-206ENST00000587201 TRAPPC4Q9Y296 219 aa15.69■□□□□ 0.1
TPM4-206ENST00000587201 IFT52Q9Y366 437 aa15.69■□□□□ 0.1
TPM4-206ENST00000587201 MED13LQ71F56 2210 aa15.69■□□□□ 0.1
TPM4-206ENST00000587201 C5orf58C9J3I9 102 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 FPR1P21462 350 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 CXCR1P25024 350 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 ACAA2P42765 397 aaKnown RBP15.68■□□□□ 0.1
TPM4-206ENST00000587201 SLC35A1P78382 337 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 IRX1P78414 480 aaPredicted RBP15.68■□□□□ 0.1
TPM4-206ENST00000587201 ZNF311Q5JNZ3 666 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 PRAMEF8Q5VWM4 474 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 PRAMEF7Q5VXH5 474 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 CCDC103Q8IW40 242 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 CLIP4Q8N3C7 705 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 BBS10Q8TAM1 723 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 TMUB1Q9BVT8 246 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 SPATA9Q9BWV2 254 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 ADAM19Q9H013 955 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 TMEM45AQ9NWC5 275 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 PRDM4Q9UKN5 801 aa15.68■□□□□ 0.1
TPM4-206ENST00000587201 NOSIPQ9Y314 301 aaKnown RBP15.68■□□□□ 0.1
TPM4-206ENST00000587201 IGKV3D-15A0A087WSY6 115 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 ZC3H12DA2A288 527 aaKnown RBP15.67■□□□□ 0.1
TPM4-206ENST00000587201 ZNF716A6NP11 495 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 GPR171O14626 319 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 EIF1BO60739 113 aaKnown RBP15.67■□□□□ 0.1
TPM4-206ENST00000587201 LYZL6O75951 148 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 SASH3O75995 380 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 IMPDH2P12268 514 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 BMP2P12643 396 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 NCF2P19878 526 aaPredicted RBP15.67■□□□□ 0.1
TPM4-206ENST00000587201 PPIBP23284 216 aaKnown RBP15.67■□□□□ 0.1
TPM4-206ENST00000587201 EDNRAP25101 427 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 ADAM8P78325 824 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 TAB1Q15750 504 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 WBP2NLQ6ICG8 309 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 ZNF704Q6ZNC4 412 aaPredicted RBP15.67■□□□□ 0.1
TPM4-206ENST00000587201 BHLHA15Q7RTS1 189 aaPredicted RBP15.67■□□□□ 0.1
TPM4-206ENST00000587201 MSRB3Q8IXL7 192 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 HSD17B8Q92506 261 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 PIGTQ969N2 578 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 CCL19Q99731 98 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 USB1Q9BQ65 265 aaKnown RBP15.67■□□□□ 0.1
TPM4-206ENST00000587201 NAA11Q9BSU3 229 aaPredicted RBP15.67■□□□□ 0.1
TPM4-206ENST00000587201 RABEP2Q9H5N1 569 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 BCL2L10Q9HD36 194 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 SLC52A3Q9NQ40 469 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 VAPAQ9P0L0 249 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 DCTN4Q9UJW0 460 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 CHST2Q9Y4C5 530 aa15.67■□□□□ 0.1
TPM4-206ENST00000587201 ZNF469Q96JG9 3925 aaPredicted RBP15.66■□□□□ 0.1
TPM4-206ENST00000587201 A0A1W2PP18 115 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 RAMP1O60894 148 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 SMPD2O60906 423 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 PGM3O95394 542 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 PLAUP00749 431 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 IDUAP35475 653 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 FOXD4Q12950 439 aaPredicted RBP15.66■□□□□ 0.1
TPM4-206ENST00000587201 CAPRIN1Q14444 709 aaKnown RBP15.66■□□□□ 0.1
TPM4-206ENST00000587201 STK11Q15831 433 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 GCNT6Q5T4J0 391 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 C20orf204Q6ZNR8 217 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 SERPINA11Q86U17 422 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 UBE2J2Q8N2K1 259 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 NFKBIDQ8NI38 313 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 APH1AQ96BI3 265 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 POTEKPQ9BYX7 375 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 NPHS2Q9NP85 383 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 NGBQ9NPG2 151 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.66■□□□□ 0.1
TPM4-206ENST00000587201 FREM1Q5H8C1 2179 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 ITPR3Q14573 2671 aa15.66■□□□□ 0.1
TPM4-206ENST00000587201 EVPLLA8MZ36 301 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 EDF1O60869 148 aaKnown RBP15.65■□□□□ 0.1
TPM4-206ENST00000587201 MRPL33O75394 65 aaKnown RBP15.65■□□□□ 0.1
TPM4-206ENST00000587201 CNOT4O95628 575 aaKnown RBP15.65■□□□□ 0.1
TPM4-206ENST00000587201 IGHV3-9P01782 118 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 ARAFP10398 606 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 PRG2P13727 222 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 IGHV1-2P23083 117 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 SLC16A1P53985 500 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 NKX6-1P78426 367 aaPredicted RBP15.65■□□□□ 0.1
TPM4-206ENST00000587201 H3F3AP84243 136 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 BNIP2Q12982 314 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 FBXW9Q5XUX1 488 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 STON2Q8WXE9 905 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 PIP5K1AQ99755 562 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 TRIM33Q9UPN9 1127 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 CORO2BQ9UQ03 480 aa15.65■□□□□ 0.1
TPM4-206ENST00000587201 VPS13CQ709C8 3753 aa15.64■□□□□ 0.09
TPM4-206ENST00000587201 TRBV5-3A0A0A0MS03 114 aa15.64■□□□□ 0.09
TPM4-206ENST00000587201 FRS3O43559 492 aa15.64■□□□□ 0.09
TPM4-206ENST00000587201 GPIP06744 558 aa15.64■□□□□ 0.09
TPM4-206ENST00000587201 ETS2P15036 469 aa15.64■□□□□ 0.09
TPM4-206ENST00000587201 HOXC12P31275 282 aa15.64■□□□□ 0.09
TPM4-206ENST00000587201 HOXC5Q00444 222 aa15.64■□□□□ 0.09
TPM4-206ENST00000587201 CDK6Q00534 326 aa15.64■□□□□ 0.09
TPM4-206ENST00000587201 CEACAM7Q14002 265 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms