RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 NOSIPQ9Y314 301 aaKnown RBP10.21□□□□□ -0.77
LIG3-207ENST00000586119 IGKV3D-15A0A087WSY6 115 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 PRAMEF27A3QJZ7 478 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 TRPC5OSA6NMA1 111 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 HDAC3O15379 428 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 OR12D1P0DN82 309 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 IGHV4-31P0DP07 118 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 PHC1P78364 1004 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 LOXL1Q08397 574 aaPredicted RBP10.2□□□□□ -0.78
LIG3-207ENST00000586119 FUT5Q11128 374 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 RAB35Q15286 201 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 SMU1Q2TAY7 513 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 ARHGAP11BQ3KRB8 267 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 TYW3Q6IPR3 259 aaKnown RBP10.2□□□□□ -0.78
LIG3-207ENST00000586119 P2RY8Q86VZ1 359 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 ANKRD46Q86W74 232 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 ADGRG3Q86Y34 549 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 MUC15Q8N387 334 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 PPP1R36Q96LQ0 422 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 MUS81Q96NY9 551 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 CCDC106Q9BWC9 280 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 NMUR2Q9GZQ4 415 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 SERINC1Q9NRX5 453 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 FAIMQ9NVQ4 179 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 ATP23Q9Y6H3 246 aa10.2□□□□□ -0.78
LIG3-207ENST00000586119 RNF103-CHMP3A0A140T963 221 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 SLC35F4A4IF30 521 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 ELOA3DA6NLF2 546 aaPredicted RBP10.19□□□□□ -0.78
LIG3-207ENST00000586119 AP3D1O14617 1153 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 STX11O75558 287 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 TGDSO95455 350 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 CPSF4O95639 269 aaKnown RBP10.19□□□□□ -0.78
LIG3-207ENST00000586119 KRT16P08779 473 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 FAM157CP0CG43 387 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 IMPDH2P12268 514 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 ZNF16P17020 682 aaPredicted RBP10.19□□□□□ -0.78
LIG3-207ENST00000586119 PTAFRP25105 342 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 MAPK1P28482 360 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 RPL3P39023 403 aaKnown RBP10.19□□□□□ -0.78
LIG3-207ENST00000586119 OR2B6P58173 313 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 VLDLRP98155 873 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 NRF1Q16656 503 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 MST1LQ2TV78 715 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 ELOA3BQ3SY89 546 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 ATP6AP1LQ52LC2 224 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 TNFAIP8L2Q6P589 184 aaPredicted RBP10.19□□□□□ -0.78
LIG3-207ENST00000586119 CLEC2AQ6UVW9 174 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 TMEM108Q6UXF1 575 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 FBXL14Q8N1E6 418 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 ELOA3Q8NG57 546 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 ZNF563Q8TA94 476 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 C10orf105Q8TEF2 133 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 XAGE5Q8WWM1 108 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 STON2Q8WXE9 905 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 ST8SIA1Q92185 356 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 APH1AQ96BI3 265 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 TUBGCP3Q96CW5 907 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 SLC35G5Q96KT7 338 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 SIKE1Q9BRV8 207 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 BEX2Q9BXY8 128 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 BHLHE41Q9C0J9 482 aaPredicted RBP10.19□□□□□ -0.78
LIG3-207ENST00000586119 ZNF350Q9GZX5 532 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 MEAF6Q9HAF1 191 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 SLC7A10Q9NS82 523 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 ATAD3AQ9NVI7 634 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 PNPOQ9NVS9 261 aa10.19□□□□□ -0.78
LIG3-207ENST00000586119 TMEM72A0PK05 275 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 ZC3H12DA2A288 527 aaKnown RBP10.18□□□□□ -0.78
LIG3-207ENST00000586119 PDLIM1O00151 329 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 EDF1O60869 148 aaKnown RBP10.18□□□□□ -0.78
LIG3-207ENST00000586119 SCN2BO60939 215 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 MRPL33O75394 65 aaKnown RBP10.18□□□□□ -0.78
LIG3-207ENST00000586119 PGCP20142 388 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 PRPS1L1P21108 318 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 IDH2P48735 452 aaKnown RBP10.18□□□□□ -0.78
LIG3-207ENST00000586119 CLDN8P56748 225 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 CSNK2A1P68400 391 aaPredicted RBP10.18□□□□□ -0.78
LIG3-207ENST00000586119 GUCY1A3Q02108 690 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 MAD2L1Q13257 205 aaPredicted RBP10.18□□□□□ -0.78
LIG3-207ENST00000586119 PDK3Q15120 406 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 TSPO2Q5TGU0 170 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 FRRS1Q6ZNA5 592 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 EIF3MQ7L2H7 374 aaKnown RBP10.18□□□□□ -0.78
LIG3-207ENST00000586119 C16orf62Q7Z3J2 963 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 FAM71CQ8NEG0 241 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 OR4A15Q8NGL6 344 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 TMEM234Q8WY98 164 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 FAM168AQ92567 244 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 CNOT9Q92600 299 aaKnown RBP10.18□□□□□ -0.78
LIG3-207ENST00000586119 RADILQ96JH8 1075 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 PRPF18Q99633 342 aaKnown RBP10.18□□□□□ -0.78
LIG3-207ENST00000586119 INPP5KQ9BT40 448 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 SLCO1B3Q9NPD5 702 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 ASB6Q9NWX5 421 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 CHRNA9Q9UGM1 479 aa10.18□□□□□ -0.78
LIG3-207ENST00000586119 ATP6V1G2-DDX39BF2Z307 99 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 KIAA0513O60268 411 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 PMS2P2O95744 297 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 CDH2P19022 906 aaPredicted RBP10.17□□□□□ -0.78
LIG3-207ENST00000586119 IGFBP5P24593 272 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms