RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SAXO2Q658L1 398 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 ZNF544Q6NX49 715 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 EMBQ6PCB8 327 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 CLEC2AQ6UVW9 174 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 FRRS1Q6ZNA5 592 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 NUDCD3Q8IVD9 361 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 CCDC103Q8IW40 242 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 FBXL14Q8N1E6 418 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 MUC15Q8N387 334 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 WDR31Q8NA23 367 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 OR4A15Q8NGL6 344 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 PMM1Q92871 262 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 TESCQ96BS2 214 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 NEURL3Q96EH8 262 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 DPY30Q9C005 99 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 OR11A1Q9GZK7 315 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.31□□□□□ -0.92
RFFL-209ENST00000581265 PARPBPQ9NWS1 579 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 POU2F3Q9UKI9 436 aa9.31□□□□□ -0.92
RFFL-209ENST00000581265 YLPM1P49750 1951 aaKnown RBP9.3□□□□□ -0.92
RFFL-209ENST00000581265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.3□□□□□ -0.926e-8■■□□□ 12.2
RFFL-209ENST00000581265 A0A1W2PR80 420 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 PRAMEF27A3QJZ7 478 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 ZNF208O43345 1280 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 ITM2AO43736 263 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 CPSF4O95639 269 aaKnown RBP9.3□□□□□ -0.92
RFFL-209ENST00000581265 ITGA5P08648 1049 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 MYZAPP0CAP1 466 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 BMP4P12644 408 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 SLC25A16P16260 332 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 IDH2P48735 452 aaKnown RBP9.3□□□□□ -0.92
RFFL-209ENST00000581265 FOXG1P55316 489 aaPredicted RBP9.3□□□□□ -0.92
RFFL-209ENST00000581265 OR2B6P58173 313 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 SLC35A1P78382 337 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 SPOCK1Q08629 439 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 IFFO1Q0D2I5 559 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 FUT5Q11128 374 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 C6orf52Q5T4I8 152 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 TNFAIP8L2Q6P589 184 aaPredicted RBP9.3□□□□□ -0.92
RFFL-209ENST00000581265 B3GLCTQ6Y288 498 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 ANKRD46Q86W74 232 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 CMIPQ8IY22 773 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 C17orf78Q8N4C9 275 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 ARFGAP2Q8N6H7 521 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 C1orf162Q8NEQ5 155 aaPredicted RBP9.3□□□□□ -0.92
RFFL-209ENST00000581265 OR52E4Q8NGH9 312 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 CNOT9Q92600 299 aaKnown RBP9.3□□□□□ -0.92
RFFL-209ENST00000581265 BEX2Q9BXY8 128 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 TMEM160Q9NX00 188 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 DCTN4Q9UJW0 460 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 CDC42EP3Q9UKI2 254 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 PRDM4Q9UKN5 801 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.3□□□□□ -0.92
RFFL-209ENST00000581265 FLVCR1Q9Y5Y0 555 aa9.3□□□□□ -0.92
RFFL-209ENST00000581265 TMED7-TICAM2A0A0A6YYA0 188 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 AGAP5A6NIR3 686 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 CLDN24A6NM45 220 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 M0R1B8 84 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 HMGN4O00479 90 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 FAAHO00519 579 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 SNUPNO95149 360 aaKnown RBP9.29□□□□□ -0.92
RFFL-209ENST00000581265 SERPINE1P05121 402 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 IMPDH2P12268 514 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 APOBEC3AP31941 199 aaPredicted RBP9.29□□□□□ -0.92
RFFL-209ENST00000581265 SLC1A3P43003 542 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 FABP6P51161 128 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 EFNA4P52798 201 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 TGFBR3Q03167 851 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 CHRNB3Q05901 458 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 SLC17A1Q14916 467 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 DPY19L1Q2PZI1 675 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 GPAT3Q53EU6 434 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 LRRC34Q8IZ02 419 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 ZNF525Q8N782 197 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 ZNF781Q8N8C0 355 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 FAM168AQ92567 244 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 PROX1Q92786 737 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 DDIT4LQ96D03 193 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 DNAJA3Q96EY1 480 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 BOD1Q96IK1 185 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 TRNT1Q96Q11 434 aaKnown RBP9.29□□□□□ -0.92
RFFL-209ENST00000581265 NAA11Q9BSU3 229 aaPredicted RBP9.29□□□□□ -0.92
RFFL-209ENST00000581265 TMEM109Q9BVC6 243 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 C1QTNF6Q9BXI9 259 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 ADAM19Q9H013 955 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 MTHFD2LQ9H903 347 aaPredicted RBP9.29□□□□□ -0.92
RFFL-209ENST00000581265 FKRPQ9H9S5 495 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 SLC17A5Q9NRA2 495 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 SLC7A10Q9NS82 523 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 UPB1Q9UBR1 384 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 MARCOQ9UEW3 520 aaPredicted RBP9.29□□□□□ -0.92
RFFL-209ENST00000581265 OSGIN1Q9UJX0 560 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 SLC9A8Q9Y2E8 581 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 AMDHD2Q9Y303 409 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 TMED7Q9Y3B3 224 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 RAP2CQ9Y3L5 183 aa9.29□□□□□ -0.92
RFFL-209ENST00000581265 TMEM72A0PK05 275 aa9.28□□□□□ -0.92
RFFL-209ENST00000581265 BIRC5O15392 142 aa9.28□□□□□ -0.92
RFFL-209ENST00000581265 CCNA2P20248 432 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms