RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PRDM4Q9UKN5 801 aa15.73■□□□□ 0.11
MKS1-209ENST00000580127 FKBP7Q9Y680 259 aa15.73■□□□□ 0.11
MKS1-209ENST00000580127 PRSS51A0A1B0GVH4 220 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 LMX1BO60663 402 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 SKAP2O75563 359 aaPredicted RBP15.72■□□□□ 0.11
MKS1-209ENST00000580127 HNF1AP20823 631 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 PGM1P36871 562 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 AP1ARQ63HQ0 302 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 OR4F3Q6IEY1 312 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 CASP12Q6UXS9 341 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 ADGRG3Q86Y34 549 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 ZNF525Q8N782 197 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 C10orf105Q8TEF2 133 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 ROPN1LQ96C74 230 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 MECRQ9BV79 373 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 DPY30Q9C005 99 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 EXOSC3Q9NQT5 275 aaKnown RBP15.72■□□□□ 0.11
MKS1-209ENST00000580127 ZDHHC2Q9UIJ5 367 aa15.72■□□□□ 0.11
MKS1-209ENST00000580127 A0A1W2PR80 420 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 VSTM5A8MXK1 200 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 NDUFS8O00217 210 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 ZNF208O43345 1280 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 KIAA0513O60268 411 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 NUDT17P0C025 328 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 OR12D1P0DN82 309 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 CHI3L1P36222 383 aaPredicted RBP15.71■□□□□ 0.11
MKS1-209ENST00000580127 IDH2P48735 452 aaKnown RBP15.71■□□□□ 0.11
MKS1-209ENST00000580127 PDLIM4P50479 330 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 GPAT3Q53EU6 434 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 CCDC103Q8IW40 242 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 CMIPQ8IY22 773 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 GSPT2Q8IYD1 628 aaKnown RBP15.71■□□□□ 0.11
MKS1-209ENST00000580127 ZNF540Q8NDQ6 660 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 OR8J2Q8NGG1 315 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 ARL5BQ96KC2 179 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 SAP130Q9H0E3 1048 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 MANSC1Q9H8J5 431 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 ASIC5Q9NY37 505 aa15.71■□□□□ 0.11
MKS1-209ENST00000580127 KRT33AO76009 404 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 CPSF4O95639 269 aaKnown RBP15.7■□□□□ 0.1
MKS1-209ENST00000580127 CCNA2P20248 432 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 KHKP50053 298 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 POLR2HP52434 150 aaKnown RBP15.7■□□□□ 0.1
MKS1-209ENST00000580127 PHC1P78364 1004 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 TXNL4AP83876 142 aaKnown RBP15.7■□□□□ 0.1
MKS1-209ENST00000580127 H3F3AP84243 136 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 TYW3Q6IPR3 259 aaKnown RBP15.7■□□□□ 0.1
MKS1-209ENST00000580127 FAM166AQ6J272 317 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 ZCCHC23Q6ZST2 131 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 CLECL1Q8IZS7 167 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 POMGNT2Q8NAT1 580 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 FAM71CQ8NEG0 241 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 TCP10LQ8TDR4 215 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 MYOZ1Q9NP98 299 aaPredicted RBP15.7■□□□□ 0.1
MKS1-209ENST00000580127 OBP2BQ9NPH6 170 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 SLC17A5Q9NRA2 495 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 SLC17A7Q9P2U7 560 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 FBXO9Q9UK97 447 aaPredicted RBP15.7■□□□□ 0.1
MKS1-209ENST00000580127 KCNS2Q9ULS6 477 aa15.7■□□□□ 0.1
MKS1-209ENST00000580127 A0A096LNT2 108 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 TMED7-TICAM2A0A0A6YYA0 188 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 SPAG7O75391 227 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 SNUPNO95149 360 aaKnown RBP15.69■□□□□ 0.1
MKS1-209ENST00000580127 ITGA5P08648 1049 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 SRD5A1P18405 259 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 MPGP29372 298 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 SNRPD2P62316 118 aaKnown RBP15.69■□□□□ 0.1
MKS1-209ENST00000580127 MAPK14Q16539 360 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 DPY19L1Q2PZI1 675 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 TNFAIP8L2Q6P589 184 aaPredicted RBP15.69■□□□□ 0.1
MKS1-209ENST00000580127 NUDCD3Q8IVD9 361 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 KIRREL3Q8IZU9 778 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 CLEC4FQ8N1N0 589 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 TRIML2Q8N7C3 387 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 WDR31Q8NA23 367 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 OR52E4Q8NGH9 312 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 HTRA1Q92743 480 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 RAB8BQ92930 207 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 PIMREGQ9BSJ6 248 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 OR11A1Q9GZK7 315 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 SERHL2Q9H4I8 314 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 PIF1Q9H611 641 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 MTHFD2LQ9H903 347 aaPredicted RBP15.69■□□□□ 0.1
MKS1-209ENST00000580127 MOV10Q9HCE1 1003 aaKnown RBP15.69■□□□□ 0.1
MKS1-209ENST00000580127 MARCOQ9UEW3 520 aaPredicted RBP15.69■□□□□ 0.1
MKS1-209ENST00000580127 TMED7Q9Y3B3 224 aa15.69■□□□□ 0.1
MKS1-209ENST00000580127 LOC100289279A0A1B0GTE1 492 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 GPIP06744 558 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 MYZAPP0CAP1 466 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 SLC1A3P43003 542 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 CLNS1AP54105 237 aaKnown RBP15.68■□□□□ 0.1
MKS1-209ENST00000580127 SPOCK1Q08629 439 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 GSTA3Q16772 222 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 C9orf135Q5VTT2 229 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 LIPNQ5VXI9 398 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 EMBQ6PCB8 327 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 PAQR6Q6TCH4 344 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 ZNF440Q8IYI8 595 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 FBXO17Q96EF6 278 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms