RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 SSBP4Q9BWG4 385 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 TRIM4Q9C037 500 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 ELOVL4Q9GZR5 314 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 COMMD4Q9H0A8 199 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 DEFB129Q9H1M3 183 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 ARRDC1-AS1Q9H2J1 176 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PPA2Q9H2U2 334 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PLGRKTQ9HBL7 147 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 PRDM7Q9NQW5 492 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 RMND1Q9NWS8 449 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 BABAM2Q9NXR7 383 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 ERVW-1Q9UQF0 538 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 MRPS28Q9Y2Q9 187 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 ALG6Q9Y672 507 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 FANCIQ9NVI1 1328 aa4.46□□□□□ -1.7
TOPBP1-210ENST00000572787 GOLGA6L9A6NEM1 432 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 C5orf60A6NFR6 353 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 C9orf118A6NHY6 69 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC22A20A6NK97 555 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 C2CD4DB7Z1M9 353 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 CCL24O00175 119 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 RHODO00212 210 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 DCTN6O00399 190 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 TNFSF11O14788 317 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ACOX3O15254 700 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 CDC14BO60729 498 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 RCBTB2O95199 551 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 GJB5O95377 273 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 PLEKHA8P1O95397 391 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 IGHG3P01860 377 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ADORA3P0DMS8 318 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 GATA1P15976 413 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 GLRA1P23415 457 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 PCSK6P29122 969 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 CRABP2P29373 138 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 OR1E1P30953 314 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 TNFSF8P32971 234 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 COILP38432 576 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 RPS19P39019 145 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 RBM34P42696 430 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 LIMS1P48059 325 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 IDH2P48735 452 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 MLLT10P55197 1068 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 CDH12P55289 794 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 PKNOX1P55347 436 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ISL1P61371 349 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 SRSF1Q07955 248 aaKnown RBP eCLIP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 UPP1Q16831 310 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC25A52Q3SY17 297 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 TP53I3Q53FA7 332 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 RBM48Q5RL73 367 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 C1orf220Q5T0J3 134 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 PRAMEF17Q5VTA0 474 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 SDHAF4Q5VUM1 108 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ANKRD26P1Q6NSI1 321 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 RFPL4BQ6ZWI9 263 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 NT5DC3Q86UY8 548 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 LINC00518Q8N0U6 118 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ZFP82Q8N141 532 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 TMEM251Q8N6I4 163 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 CATSPER1Q8NEC5 780 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 NOXO1Q8NFA2 376 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 OR11H4Q8NGC9 324 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 OR10V1Q8NGI7 309 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 OR4Q3Q8NH05 313 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 FAM222BQ8WU58 562 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 FAM172AQ8WUF8 416 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC25A43Q8WUT9 341 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 TFGQ92734 400 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 RORBQ92753 470 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 CCDC126Q96EE4 140 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ITCHQ96J02 903 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ERGIC2Q96RQ1 377 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 RBBP8Q99708 897 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ATP5SQ99766 215 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 EBNA1BP2Q99848 306 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 KXD1Q9BQD3 176 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 TEX101Q9BY14 249 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ACTR3CQ9C0K3 210 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 LAT2Q9GZY6 243 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ING2Q9H160 280 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 OR51M1Q9H341 326 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 PLEKHA1Q9HB21 404 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ASCL3Q9NQ33 180 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 DIABLOQ9NR28 239 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 SERTAD4Q9NUC0 356 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 DCAF13Q9NV06 445 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 RHBDL2Q9NX52 303 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 CCDC59Q9P031 241 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ERGIC3Q9Y282 383 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 WIPI2Q9Y4P8 454 aa4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-210ENST00000572787 NSG1A0A0A6YYJ2 146 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 A0A1B0GUS0 222 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC22A23A1A5C7 686 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 PP2D1A8MPX8 630 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 H0YIZ8 118 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 H3BNH8 94 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 ZIC3O60481 467 aa4.44□□□□□ -1.7
TOPBP1-210ENST00000572787 SEMA7AO75326 666 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms