RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 ZNF100Q8IYN0 542 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 CLEC4FQ8N1N0 589 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 KBTBD8Q8NFY9 601 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 OR8J2Q8NGG1 315 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 OR4A15Q8NGL6 344 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 SLC25A43Q8WUT9 341 aaPredicted RBP8.12□□□□□ -1.11
CDH13-210ENST00000567445 OIT3Q8WWZ8 545 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 ZNF75CPQ92670 426 aaPredicted RBP8.12□□□□□ -1.11
CDH13-210ENST00000567445 NEUROG1Q92886 237 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 MUCL1Q96DR8 90 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 TRIM44Q96DX7 344 aaPredicted RBP8.12□□□□□ -1.11
CDH13-210ENST00000567445 SLC35G5Q96KT7 338 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 OR51I1Q9H343 314 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 ACER3Q9NUN7 267 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 EMC3Q9P0I2 261 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 PRSS50Q9UI38 385 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 PCDHGB4Q9UN71 923 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 LIPT1Q9Y234 373 aa8.12□□□□□ -1.11
CDH13-210ENST00000567445 MAGED1Q9Y5V3 778 aaPredicted RBP8.12□□□□□ -1.11
CDH13-210ENST00000567445 PLCE1Q9P212 2302 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 IGKV3D-15A0A087WSY6 115 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 VSTM5A8MXK1 200 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 J3QW42 95 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 GHRHP01286 108 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 GUSBP08236 651 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 GGT1P19440 569 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 COX5AP20674 150 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 IGHV1-2P23083 117 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 EDNRAP25101 427 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 PGM1P36871 562 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 APOBEC1P41238 236 aaKnown RBP8.11□□□□□ -1.11
CDH13-210ENST00000567445 CASP9P55211 416 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 SUMO1P63165 101 aaKnown RBP8.11□□□□□ -1.11
CDH13-210ENST00000567445 KRTAP1-1Q07627 177 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 PDK3Q15120 406 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 PDCD2Q16342 344 aaPredicted RBP8.11□□□□□ -1.11
CDH13-210ENST00000567445 MAPK14Q16539 360 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 TIMM23BQ5SRD1 257 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 ATAD3BQ5T9A4 648 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 AP1ARQ63HQ0 302 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 ABLIM2Q6H8Q1 611 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 OLIG3Q7RTU3 272 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 MTDHQ86UE4 582 aaKnown RBP8.11□□□□□ -1.11
CDH13-210ENST00000567445 ANKRD46Q86W74 232 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 FAM71CQ8NEG0 241 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 VPS37AQ8NEZ2 397 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 STK35Q8TDR2 534 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 AENQ8WTP8 325 aaKnown RBP8.11□□□□□ -1.11
CDH13-210ENST00000567445 XAGE5Q8WWM1 108 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 PPP1R36Q96LQ0 422 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 CCDC106Q9BWC9 280 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 DPY30Q9C005 99 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 POLE3Q9NRF9 147 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 FAIMQ9NVQ4 179 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 SLC35A3Q9Y2D2 325 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 WDR45Q9Y484 360 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 SPIN1Q9Y657 262 aaPredicted RBP8.11□□□□□ -1.11
CDH13-210ENST00000567445 COL6A5A8TX70 2615 aa8.11□□□□□ -1.11
CDH13-210ENST00000567445 RTTNQ86VV8 2226 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 GOLGA8QA0A0J9YX86 632 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 PRSS51A0A1B0GVH4 220 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 GOLGA8OA6NCC3 632 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 SHISA9B4DS77 424 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 GOLGA8NF8WBI6 632 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 ANKRD28O15084 1053 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 ITM2AO43736 263 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 RAMP1O60894 148 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 SCN2BO60939 215 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 CRLF1O75462 422 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 SNUPNO95149 360 aaKnown RBP8.1□□□□□ -1.11
CDH13-210ENST00000567445 PGM3O95394 542 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 CD8AP01732 235 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 IGHV4-39P01824 125 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 SERPINE1P05121 402 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 MYZAPP0CAP1 466 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 OR12D1P0DN82 309 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 TFPIP10646 304 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 UQCRC2P22695 453 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 FKBP2P26885 142 aaKnown RBP8.1□□□□□ -1.11
CDH13-210ENST00000567445 ABCE1P61221 599 aaKnown RBP8.1□□□□□ -1.11
CDH13-210ENST00000567445 DMTNQ08495 405 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 FAPQ12884 760 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 CHI3L2Q15782 390 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 ANXA8L1Q5VT79 327 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 FBXW9Q5XUX1 488 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 TYW3Q6IPR3 259 aaKnown RBP8.1□□□□□ -1.11
CDH13-210ENST00000567445 TNFAIP8L2Q6P589 184 aaPredicted RBP8.1□□□□□ -1.11
CDH13-210ENST00000567445 EMBQ6PCB8 327 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 NLRC3Q7RTR2 1065 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.1□□□□□ -1.11
CDH13-210ENST00000567445 DTX2Q86UW9 622 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 UBE2J2Q8N2K1 259 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 ZNF433Q8N7K0 673 aaPredicted RBP8.1□□□□□ -1.11
CDH13-210ENST00000567445 ZNF781Q8N8C0 355 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 MAPK1IP1LQ8NDC0 245 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 ZNF563Q8TA94 476 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 APH1AQ96BI3 265 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 TESCQ96BS2 214 aa8.1□□□□□ -1.11
CDH13-210ENST00000567445 ROPN1LQ96C74 230 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms