RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 MAGEB18Q96M61 343 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 HDHD5Q9BXW7 423 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 RAD21L1Q9H4I0 556 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 EMC3Q9P0I2 261 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 TMEM181Q9P2C4 612 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 MTORP42345 2549 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 A0A0G2JPF8 293 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 HNRNPCL2B2RXH8 293 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 HNRNPCL3B7ZW38 293 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 DNPH1O43598 174 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 HNRNPCL1O60812 293 aaKnown RBP17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 LYZL6O75951 148 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 PLAUP00749 431 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 THBS1P07996 1170 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 ROS1P08922 2347 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 HNRNPCL4P0DMR1 293 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 IMPDH2P12268 514 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 BMP2P12643 396 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 ATP4BP51164 291 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 ITGADQ13349 1161 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 LARS2Q15031 903 aaKnown RBP17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 P2RY6Q15077 328 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 PDK3Q15120 406 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 TAB1Q15750 504 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 ZNF704Q6ZNC4 412 aaPredicted RBP17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 BHLHA15Q7RTS1 189 aaPredicted RBP17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 KRTAP1-3Q8IUG1 177 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 ZNF100Q8IYN0 542 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 C10orf111Q8N326 155 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 CCL19Q99731 98 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 SPATA9Q9BWV2 254 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 ADAM19Q9H013 955 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 CACYBPQ9HB71 228 aaKnown RBP17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 VAPAQ9P0L0 249 aa17.68■□□□□ 0.42
SHCBP1-203ENST00000564272 IGHV3-9P01782 118 aa17.67■□□□□ 0.42
SHCBP1-203ENST00000564272 NR1H2P55055 460 aa17.67■□□□□ 0.42
SHCBP1-203ENST00000564272 GCNT6Q5T4J0 391 aa17.67■□□□□ 0.42
SHCBP1-203ENST00000564272 C20orf204Q6ZNR8 217 aa17.67■□□□□ 0.42
SHCBP1-203ENST00000564272 SERPINA11Q86U17 422 aa17.67■□□□□ 0.42
SHCBP1-203ENST00000564272 BBS10Q8TAM1 723 aa17.67■□□□□ 0.42
SHCBP1-203ENST00000564272 POTEKPQ9BYX7 375 aa17.67■□□□□ 0.42
SHCBP1-203ENST00000564272 TRAPPC4Q9Y296 219 aa17.67■□□□□ 0.42
SHCBP1-203ENST00000564272 NOSIPQ9Y314 301 aaKnown RBP17.67■□□□□ 0.42
SHCBP1-203ENST00000564272 ZNF469Q96JG9 3925 aaPredicted RBP17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 ACANP16112 2415 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 TRBV5-3A0A0A0MS03 114 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 C5orf58C9J3I9 102 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 FRS3O43559 492 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 FPR1P21462 350 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 IGHV1-2P23083 117 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 NTF4P34130 210 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 SLC16A1P53985 500 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 COPZ1P61923 177 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 SLC35A1P78382 337 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 HOXC5Q00444 222 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 BNIP2Q12982 314 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 CAPRIN1Q14444 709 aaKnown RBP17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 ZNF311Q5JNZ3 666 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 PRAMEF8Q5VWM4 474 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 PRAMEF7Q5VXH5 474 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 WBP2NLQ6ICG8 309 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 SEZ6L2Q6UXD5 910 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 ATG4DQ86TL0 474 aaPredicted RBP17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 NFKBIDQ8NI38 313 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 IKZF5Q9H5V7 419 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 BCL2L10Q9HD36 194 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 NPHS2Q9NP85 383 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 DCTN4Q9UJW0 460 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 ZNF232Q9UNY5 417 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 IFT52Q9Y366 437 aa17.66■□□□□ 0.42
SHCBP1-203ENST00000564272 DSCAMO60469 2012 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 FLNAP21333 2647 aaKnown RBP17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 SMPD2O60906 423 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 PGM3O95394 542 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 ARAFP10398 606 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 NCF2P19878 526 aaPredicted RBP17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 COX5AP20674 150 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 CXCR1P25024 350 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 ADSLP30566 484 aaPredicted RBP17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 HOXC12P31275 282 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 IDUAP35475 653 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 NKX6-1P78426 367 aaPredicted RBP17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 H3F3AP84243 136 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 STK11Q15831 433 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 UBE2J2Q8N2K1 259 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 HSD17B8Q92506 261 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 PIGTQ969N2 578 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 APH1AQ96BI3 265 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 PIP5K1AQ99755 562 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 TMEM204Q9BSN7 226 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 RSPO3Q9BXY4 272 aaPredicted RBP17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 ARMC7Q9H6L4 198 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 DLL4Q9NR61 685 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 TMEM45AQ9NWC5 275 aa17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.65■□□□□ 0.42
SHCBP1-203ENST00000564272 C2CD3Q4AC94 2353 aa17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 GPR171O14626 319 aa17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 EDF1O60869 148 aaKnown RBP17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 MAP2K6P52564 334 aa17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 CEACAM7Q14002 265 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms