RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 OR52L1Q8NGH7 329 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 OR6S1Q8NH40 331 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 FANK1Q8TC84 345 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 SLC29A1Q99808 456 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 NIPSNAP1Q9BPW8 284 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 KLHDC3Q9BQ90 382 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 TAPBPLQ9BX59 468 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 TEX12Q9BXU0 123 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 GABARAPL3Q9BY60 117 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 RIBC2Q9H4K1 309 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 B3GNT3Q9Y2A9 372 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 FREM2Q5SZK8 3169 aa11.6□□□□□ -0.55
CLK3-214ENST00000564096 AKAP13Q12802 2813 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 IGKV1D-42A0A075B6H8 117 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 UNC119BA6NIH7 251 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 H3BN98 237 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 OR7A10O76100 309 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 GASTP01350 101 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 TFPIP10646 304 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 POU2F1P14859 743 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 FUT4P22083 530 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 IDUAP35475 653 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 GSSP48637 474 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ESRRGP62508 458 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ANKDD1AQ495B1 522 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 FAM69AQ5T7M9 428 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 C1orf140Q5VVS0 124 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 Q6ZS92 163 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ASB18Q6ZVZ8 466 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 TMPRSS11FQ6ZWK6 438 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ZER1Q7Z7L7 766 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 GALNT5Q7Z7M9 940 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ADGRG3Q86Y34 549 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 SLC43A2Q8N370 569 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 TMEM251Q8N6I4 163 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 CLDN22Q8N7P3 220 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 TEX47Q8TBZ9 253 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 POC1BQ8TC44 478 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ABHD17AQ96GS6 310 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ADI1Q9BV57 179 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 PRRG3Q9BZD7 231 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 FKRPQ9H9S5 495 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ZNF229Q9UJW7 825 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 TP53TG5Q9Y2B4 290 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ZNF337Q9Y3M9 751 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 CSAG2Q9Y5P2 127 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 CDH10Q9Y6N8 788 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 NCOR2Q9Y618 2525 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 ACACAQ13085 2346 aa11.59□□□□□ -0.55
CLK3-214ENST00000564096 OR2M5A3KFT3 312 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 SHISA8B8ZZ34 492 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 H3BML4 177 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 HCN1O60741 890 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 RFPL3SP0C7P2 107 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 PEPDP12955 493 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 OSMP13725 252 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 POU3F2P20265 443 aaPredicted RBP11.58□□□□□ -0.56
CLK3-214ENST00000564096 RFC3P40938 356 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 MAGEA5P43359 124 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 CD97P48960 835 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 TPD52P55327 224 aaPredicted RBP11.58□□□□□ -0.56
CLK3-214ENST00000564096 ZNF74Q16587 644 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 TMEM44Q2T9K0 475 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 PDSS1Q5T2R2 415 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 TTC23Q5W5X9 447 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 KLHL17Q6TDP4 642 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 ZNF620Q6ZNG0 422 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 RASSF6Q6ZTQ3 369 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 MAMDC2Q7Z304 686 aaPredicted RBP11.58□□□□□ -0.56
CLK3-214ENST00000564096 PRICKLE2Q7Z3G6 844 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 NANOGNBQ7Z5D8 188 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 YRDCQ86U90 279 aaKnown RBP11.58□□□□□ -0.56
CLK3-214ENST00000564096 CYGBQ8WWM9 190 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 ASPNQ9BXN1 380 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 POTEKPQ9BYX7 375 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 TOR3AQ9H497 397 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 MEPEQ9NQ76 525 aaPredicted RBP11.58□□□□□ -0.56
CLK3-214ENST00000564096 NANSQ9NR45 359 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 C20orf141Q9NUB4 165 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 TBC1D23Q9NUY8 699 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 TMEFF2Q9UIK5 374 aaPredicted RBP11.58□□□□□ -0.56
CLK3-214ENST00000564096 RAB26Q9ULW5 256 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 HDGFL3Q9Y3E1 203 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 CORINQ9Y5Q5 1042 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 AP4B1Q9Y6B7 739 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 DOCK10Q96BY6 2186 aa11.58□□□□□ -0.56
CLK3-214ENST00000564096 H0YAE9 185 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 KLF4O43474 513 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 ZIC3O60481 467 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 NPIPB7O75200 414 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 RCBTB2O95199 551 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 SNAP29O95721 258 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 CH25HO95992 272 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 CRYABP02511 175 aaKnown RBP11.57□□□□□ -0.56
CLK3-214ENST00000564096 PDGFAP04085 211 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 HIST1H2ABP04908 130 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 BMP7P18075 431 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 CHMP24386 653 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 CAPGP40121 348 aa11.57□□□□□ -0.56
CLK3-214ENST00000564096 RPS5P46782 204 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms