RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 EFCAB10A6NFE3 127 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 ANKUB1A6NFN9 424 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 TMEM200CA6NKL6 621 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 CLCA1A8K7I4 914 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 FAM47E-STBD1D6RA91 191 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 RGS10O43665 173 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 SCO2O43819 266 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 RAD1O60671 282 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 WBP4O75554 376 aaKnown RBP8.84□□□□□ -0.99
UBFD1-202ENST00000563366 ITGA10O75578 1167 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 SLC25A12O75746 678 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 OR2J2O76002 312 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 TP53P04637 393 aaPredicted RBP8.84□□□□□ -0.99
UBFD1-202ENST00000563366 GABRB1P18505 474 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 CXCR1P25024 350 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 ITPKBP27987 946 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 RBMS1P29558 406 aaKnown RBP8.84□□□□□ -0.99
UBFD1-202ENST00000563366 OTX2P32243 289 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 DLSTP36957 453 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 SSR4P51571 173 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 POLR2HP52434 150 aaKnown RBP8.84□□□□□ -0.99
UBFD1-202ENST00000563366 FOXL2P58012 376 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 SLC35A2P78381 396 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 CHAF1BQ13112 559 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 JMJD6Q6NYC1 403 aaPredicted RBP8.84□□□□□ -0.99
UBFD1-202ENST00000563366 BORAQ6PGQ7 559 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 LRFN4Q6PJG9 635 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 SMARCD3Q6STE5 483 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 CBLN3Q6UW01 205 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 APOOLQ6UXV4 268 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 WDR88Q6ZMY6 472 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 PRSS48Q7RTY5 328 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 GRINAQ7Z429 371 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 MRGPREQ86SM8 312 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 ATG4DQ86TL0 474 aaPredicted RBP8.84□□□□□ -0.99
UBFD1-202ENST00000563366 OAFQ86UD1 273 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 MARCH3Q86UD3 253 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 GPALPP1Q8IXQ4 340 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 ASB15Q8WXK1 588 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 FCGR1BQ92637 280 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 HGDQ93099 445 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 RFKQ969G6 155 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 KIAA1143Q96AT1 154 aaPredicted RBP8.84□□□□□ -0.99
UBFD1-202ENST00000563366 SGTBQ96EQ0 304 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 PLPPR2Q96GM1 343 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 RASL10BQ96S79 203 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 TMPRSS13Q9BYE2 586 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 DPH1Q9BZG8 443 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 DUSP21Q9H596 190 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 METTL7AQ9H8H3 244 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 ZNF160Q9HCG1 818 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 FAM86C1Q9NVL1 165 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 FOXJ2Q9P0K8 574 aa8.84□□□□□ -0.99
UBFD1-202ENST00000563366 MEGF11A6BM72 1044 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 ENO4A6NNW6 628 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 PTGES3LE9PB15 166 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 KPNA4O00629 521 aaPredicted RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 PIP5K1CO60331 668 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 SERPINA7P05543 415 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 PIPP12273 146 aaPredicted RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 JUNBP17275 347 aaPredicted RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 FMO3P31513 532 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 SLC6A6P31641 620 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 GRK5P34947 590 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 ALDH3B2P48448 385 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 ZNF41P51814 821 aaPredicted RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 SH3BGRP55822 239 aaPredicted RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 FBXW4P57775 412 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 PRPS1P60891 318 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 GABREP78334 506 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 CRYZQ08257 329 aaKnown RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 TUBA3CQ13748 450 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 SNAPC1Q16533 368 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 PGGHGQ32M88 737 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 NDUFAF6Q330K2 333 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 ZBED5Q49AG3 693 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 TMEM236Q5W0B7 351 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 SLC30A6Q6NXT4 461 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 ARHGAP11AQ6P4F7 1023 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 SHISA2Q6UWI4 295 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 ISLR2Q6UXK2 745 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 Q6ZPB1 254 aaPredicted RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 RTL4Q6ZR62 310 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 KCTD8Q6ZWB6 473 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 PPP1R32Q7Z5V6 425 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 GPR141Q7Z602 305 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 RPS19BP1Q86WX3 136 aaKnown RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 FAM26EQ8N5C1 309 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 PFN4Q8NHR9 129 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 C9orf43Q8TAL5 461 aaPredicted RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 APH1BQ8WW43 257 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 LIPHQ8WWY8 451 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 SH3YL1Q96HL8 342 aaPredicted RBP8.83□□□□□ -1
UBFD1-202ENST00000563366 GPA33Q99795 319 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 COPS4Q9BT78 406 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 TSSK6Q9BXA6 273 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 OR52D1Q9H346 318 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 FN3KQ9H479 309 aa8.83□□□□□ -1
UBFD1-202ENST00000563366 EGLN3Q9H6Z9 239 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms