RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 RPL5P46777 297 aaKnown RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 SLC6A8P48029 635 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 TMED10P49755 219 aaKnown RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 MMP16P51512 607 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CCR4P51679 360 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 NR1H2P55055 460 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CTBP2P56545 445 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 COPZ1P61923 177 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 RPS18P62269 152 aaKnown RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 CDK5Q00535 292 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 PRKCDQ05655 676 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 BTBD16Q32M84 506 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 PLAG1Q6DJT9 500 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 WBP2NLQ6ICG8 309 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 ULK3Q6PHR2 472 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CBLN3Q6UW01 205 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 LINC00114Q6XXX2 140 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 ZNF620Q6ZNG0 422 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 NDUFAF7Q7L592 441 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 PPP1R32Q7Z5V6 425 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 MARCH3Q86UD3 253 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 MISPQ8IVT2 679 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CCDC103Q8IW40 242 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CADM2Q8N3J6 435 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 ESX1Q8N693 406 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 IQCF1Q8N6M8 205 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 TMCO5AQ8N6Q1 288 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CLDN22Q8N7P3 220 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 BPIFB6Q8NFQ5 453 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 OR11G2Q8NGC1 345 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 OR8D4Q8NGM9 314 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 TEX47Q8TBZ9 253 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 RNF217Q8TC41 542 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 SLC22A8Q8TCC7 542 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 RNF138Q8WVD3 245 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 DNAJA4Q8WW22 397 aaPredicted RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 UBE2FQ969M7 185 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 PLA2G12AQ9BZM1 189 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 RTN4RQ9BZR6 473 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 DSN1Q9H410 356 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 EGLN3Q9H6Z9 239 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 GPN2Q9H9Y4 310 aaPredicted RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 MMP25Q9NPA2 562 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 RASSF1Q9NS23 344 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 PAK1IP1Q9NWT1 392 aaPredicted RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 ZNF226Q9NYT6 803 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 MYOTQ9UBF9 498 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 AASSQ9UDR5 926 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 FARSAQ9Y285 508 aaKnown RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 MED31Q9Y3C7 131 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CDH10Q9Y6N8 788 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CPAMD8Q8IZJ3 1885 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 PCSK5Q92824 1860 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 A0A087WUJ7 227 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 NSG1A0A0A6YYJ2 146 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 C17orf51A8MQB3 221 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 C21orf140B9A014 251 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 K7EM74 188 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 KPNA4O00629 521 aaPredicted RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 NKX2-8O15522 239 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 SCO2O43819 266 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 MPZL2O60487 215 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 OR2J2O76002 312 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 CELA2AP08217 269 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 HTR1AP08908 422 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 PNMTP11086 282 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 IFI30P13284 250 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 EEF1B2P24534 225 aaKnown RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 MST1P26927 711 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 OTX2P32243 289 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 ALDH3B2P48448 385 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 SMSP52788 366 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 GAS1P54826 345 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 FBXW4P57775 412 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 SNRPGP62308 76 aaKnown RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 RPS15P62841 145 aaKnown RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 CSNK2BP67870 215 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 DNASE1L3Q13609 305 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 GINS1Q14691 196 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 SSPNQ14714 243 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 NTRK2Q16620 822 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 SMN1Q16637 294 aaKnown RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 DEFB109BQ30KR1 87 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 NADK2Q4G0N4 442 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 TMEM201Q5SNT2 666 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 FOXB2Q5VYV0 432 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 PTCHD4Q6ZW05 846 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 TMPRSS11FQ6ZWK6 438 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 NUP54Q7Z3B4 507 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 MRGPREQ86SM8 312 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 ATG4DQ86TL0 474 aaPredicted RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 LSRQ86X29 649 aaPredicted RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 SLC15A4Q8N697 577 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 NLGN4YQ8NFZ3 816 aaPredicted RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 OR5W2Q8NH69 310 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 FANK1Q8TC84 345 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 CPT1CQ8TCG5 803 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 BRIX1Q8TDN6 353 aaKnown RBP6.84□□□□□ -1.31
TPM1-231ENST00000561395 SGCDQ92629 289 aa6.84□□□□□ -1.31
TPM1-231ENST00000561395 OSTF1Q92882 214 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms