RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 DPY19L2P2Q6ZN68 376 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 CACTIN-AS1Q8N1I8 211 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 LRRC17Q8N6Y2 441 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 BBS1Q8NFJ9 593 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 DUSP19Q8WTR2 217 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 DEPDC7Q96QD5 511 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 TAPBPLQ9BX59 468 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 RYDENQ9NUL5 291 aaKnown RBP11.75□□□□□ -0.53
SNX1-211ENST00000560829 TOR4AQ9NXH8 423 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 H2AFY2Q9P0M6 372 aaPredicted RBP11.75□□□□□ -0.53
SNX1-211ENST00000560829 CLEC2DQ9UHP7 191 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 EXOSC1Q9Y3B2 195 aaKnown RBP11.75□□□□□ -0.53
SNX1-211ENST00000560829 WDFY3Q8IZQ1 3526 aa11.75□□□□□ -0.53
SNX1-211ENST00000560829 IGLV3-32A0A0A0MS00 114 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 TMEM129A0AVI4 362 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 RIIAD1A6NNX1 92 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 PRR33A8MZF0 331 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 LRRN3E7EW58 273 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 CSO75390 466 aaKnown RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 MT-CO3P00414 261 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 IGHA1P01876 353 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 SCG5P05408 212 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 TSPAN19P0C672 248 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 ASAH2BP0C7U1 165 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 GP1BBP13224 206 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 HK1P19367 917 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 LIMK1P53667 647 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 SPEM2Q0P670 501 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 ITGADQ13349 1161 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 SPCS2Q15005 226 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 QPRTQ15274 297 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 SPHARQ15513 63 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 MED22Q15528 200 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 CSRP2Q16527 193 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 NTRK2Q16620 822 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 SLC35F1Q5T1Q4 408 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 ARMC4Q5T2S8 1044 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 PLBD1Q6P4A8 553 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 MEPCEQ7L2J0 689 aaKnown RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 GRINAQ7Z429 371 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 PTP4A1Q93096 173 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 RASL10BQ96S79 203 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 NRIP3Q9NQ35 241 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 PISDQ9UG56 409 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 CCDC187A0A096LP49 1063 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 ANKUB1A6NFN9 424 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 FAM183AA6NL82 134 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 C4orf47A7E2U8 309 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 MCIDASD6RGH6 385 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 PRR23D1E9PI22 279 aaPredicted RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 J3QRE1 110 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 ETV2O00321 342 aaPredicted RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 SOCS6O14544 535 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 IDH3BO43837 385 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 NPIPB7O75200 414 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 OR2J2O76002 312 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 IFNGP01579 166 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 JMJD7P0C870 316 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 PRR23D2P0DMB1 279 aaPredicted RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 APEHP13798 732 aaKnown RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 ZNF182P17025 639 aaPredicted RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 ZNF3P17036 446 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 MYL12AP19105 171 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 CXCR1P25024 350 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 HTR3AP46098 478 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 POLR2HP52434 150 aaKnown RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 ROR2Q01974 943 aaKnown RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 DOC2BQ14184 412 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 COL28A1Q2UY09 1125 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 CCDC157Q569K6 752 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 TIPARPQ7Z3E1 657 aaKnown RBP11.74□□□□□ -0.53
SNX1-211ENST00000560829 ARMC10Q8N2F6 343 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 SLC37A3Q8NCC5 494 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 OR11G2Q8NGC1 345 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 OR5M3Q8NGP4 307 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 OPALINQ96PE5 141 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 FKRPQ9H9S5 495 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 TIMMDC1Q9NPL8 285 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 NANSQ9NR45 359 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 TAS2R10Q9NYW0 307 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 KLHL21Q9UJP4 597 aa11.74□□□□□ -0.53
SNX1-211ENST00000560829 TRAV36DV7A0A075B6V5 113 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 PMS2P1A4D2B8 440 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 SLC22A31A6NKX4 558 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 C9orf172C9J069 976 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 CCRL2O00421 344 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 MYL12BO14950 172 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 LRP3O75074 770 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 NUDT14O95848 222 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 BCL10O95999 233 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 NR4A1P22736 598 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 MSX1P28360 303 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 PTGDSP41222 190 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 ETV1P50549 477 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 LTBQ06643 244 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 MLLT11Q13015 90 aaPredicted RBP11.73□□□□□ -0.53
SNX1-211ENST00000560829 C1DQ13901 141 aaKnown RBP11.73□□□□□ -0.53
SNX1-211ENST00000560829 CRMP1Q14194 572 aa11.73□□□□□ -0.53
SNX1-211ENST00000560829 ZNF791Q3KP31 576 aaPredicted RBP11.73□□□□□ -0.53
SNX1-211ENST00000560829 TMEM81Q6P7N7 255 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms