RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 STK32CQ86UX6 486 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 CALHM3Q86XJ0 350 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 MSRB3Q8IXL7 192 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 OR10D3Q8NH80 312 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 FAM110BQ8TC76 370 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 LRTOMTQ8WZ04 291 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 SLC9A6Q92581 669 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 GIMAP5Q96F15 307 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 SMR3AQ99954 134 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 GSX2Q9BZM3 304 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 UBQLN4Q9NRR5 601 aa12.14□□□□□ -0.47
SMAD3-214ENST00000560402 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.13□□□□□ -0.47
SMAD3-214ENST00000560402 A0A1W2PRB8 838 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 TCRBV5S2A0A599 114 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 KCNK2O95069 426 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 ALOX5P09917 674 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 PABPC4LP0CB38 370 aaKnown RBP12.13□□□□□ -0.47
SMAD3-214ENST00000560402 ACP2P11117 423 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 HOXB9P17482 250 aaPredicted RBP12.13□□□□□ -0.47
SMAD3-214ENST00000560402 EIF1P41567 113 aaKnown RBP12.13□□□□□ -0.47
SMAD3-214ENST00000560402 CDKN2CP42773 168 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 ANXA11P50995 505 aaKnown RBP12.13□□□□□ -0.47
SMAD3-214ENST00000560402 PRKAG1P54619 331 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 FADDQ13158 208 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 MLC1Q15049 377 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 ATP6AP1Q15904 470 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 CTU2Q2VPK5 515 aaKnown RBP12.13□□□□□ -0.47
SMAD3-214ENST00000560402 GTDC1Q4AE62 458 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 ZNF385BQ569K4 471 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 INTS11Q5TA45 600 aaKnown RBP12.13□□□□□ -0.47
SMAD3-214ENST00000560402 GTF2IRD2BQ6EKJ0 949 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 ZBTB49Q6ZSB9 765 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 BEND4Q6ZU67 534 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 GTF2IRD2Q86UP8 949 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 COX18Q8N8Q8 333 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 C11orf65Q8NCR3 313 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 OR2V1Q8NHB1 315 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 OR5P2Q8WZ92 322 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 CIDECQ96AQ7 238 aaPredicted RBP12.13□□□□□ -0.47
SMAD3-214ENST00000560402 SLCO4A1Q96BD0 722 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 ARSGQ96EG1 525 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 SLC47A1Q96FL8 570 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 ZC3HAV1LQ96H79 300 aaKnown RBP12.13□□□□□ -0.47
SMAD3-214ENST00000560402 Q96MF0 132 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 STACQ99469 402 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 SEPHS2Q99611 448 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 TPT1P8Q9HAU6 139 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 DUSP22Q9NRW4 184 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 MED17Q9NVC6 651 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 BAG5Q9UL15 447 aa12.13□□□□□ -0.47
SMAD3-214ENST00000560402 MAGEA13PA6NCF6 341 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 SHISA8B8ZZ34 492 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 ADAMDEC1O15204 470 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 GMFGO60234 142 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 SCN2BO60939 215 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 SOX30O94993 753 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 IFNA14P01570 189 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 PAX1P15863 534 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 PSMB1P20618 241 aaKnown RBP12.12□□□□□ -0.47
SMAD3-214ENST00000560402 UQCRC2P22695 453 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 SOAT1P35610 550 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 MAGEA8P43361 318 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 SLC6A8P48029 635 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 GTF2A1P52655 376 aaPredicted RBP12.12□□□□□ -0.47
SMAD3-214ENST00000560402 AQP4P55087 323 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 SUMO3P55854 103 aaPredicted RBP12.12□□□□□ -0.47
SMAD3-214ENST00000560402 POU6F2P78424 691 aaPredicted RBP12.12□□□□□ -0.47
SMAD3-214ENST00000560402 RBBP4Q09028 425 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 VEZF1Q14119 521 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 DUSP5Q16690 384 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 EXOC3L2Q2M3D2 409 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 VMACQ2NL98 169 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 EXOSC6Q5RKV6 272 aaKnown RBP12.12□□□□□ -0.47
SMAD3-214ENST00000560402 ANKRD26P1Q6NSI1 321 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 STAC2Q6ZMT1 411 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 PLEKHM3Q6ZWE6 761 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 GALNT10Q86SR1 603 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 CLECL1Q8IZS7 167 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 LILRA2Q8N149 483 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 ZNF527Q8NB42 609 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 SLC16A11Q8NCK7 471 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 OR4C3Q8NH37 302 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 FBXO30Q8TB52 745 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 NUDT8Q8WV74 236 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 PERPQ96FX8 193 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 KLHL15Q96M94 604 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 SLC35A5Q9BS91 424 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 GIN1Q9NXP7 522 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 GMPR2Q9P2T1 348 aaKnown RBP12.12□□□□□ -0.47
SMAD3-214ENST00000560402 SCOCQ9UIL1 159 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 GPR52Q9Y2T5 361 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 DNHD1Q96M86 4753 aa12.12□□□□□ -0.47
SMAD3-214ENST00000560402 FN1P02751 2386 aaKnown RBP12.11□□□□□ -0.47
SMAD3-214ENST00000560402 RNF103-CHMP3A0A140T963 221 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 TMEM247A6NEH6 219 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 H7C1Q1 480 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 GNGT2O14610 69 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 TNFSF11O14788 317 aa12.11□□□□□ -0.47
SMAD3-214ENST00000560402 CXCL13O43927 109 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms