RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 LIME1Q9H400 295 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 TMEM38AQ9H6F2 299 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 NT5DC2Q9H857 520 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 BRF2Q9HAW0 419 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 PROK2Q9HC23 129 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 SH2D2AQ9NP31 389 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 ISYNA1Q9NPH2 558 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 PRTFDC1Q9NRG1 225 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 PNO1Q9NRX1 252 aaKnown RBP5.36□□□□□ -1.55
USP3-212ENST00000559276 DDX28Q9NUL7 540 aaKnown RBP5.36□□□□□ -1.55
USP3-212ENST00000559276 SIRT5Q9NXA8 310 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 PTTG3PQ9NZH4 202 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 MYOTQ9UBF9 498 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 Q9UFV3 132 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 UTS2RQ9UKP6 389 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 FBXW2Q9UKT8 454 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.36□□□□□ -1.55
USP3-212ENST00000559276 DAPP1Q9UN19 280 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 YARS2Q9Y2Z4 477 aaKnown RBP5.36□□□□□ -1.55
USP3-212ENST00000559276 DYRK1BQ9Y463 629 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 KCNE2Q9Y6J6 123 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 ARHGAP21Q5T5U3 1957 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 KIAA1549Q9HCM3 1950 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 MTORP42345 2549 aa5.36□□□□□ -1.55
USP3-212ENST00000559276 FAM221AA4D161 298 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 CCDC182A6NF36 153 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 URADA6NGE7 173 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 ZAR1LA6NP61 321 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 NOTOA8MTQ0 251 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 KDM4EB2RXH2 506 aaPredicted RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 NPIPA2E9PIF3 369 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 ZNF670-ZNF695F2Z2N8 137 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 NPIPA3F8WFD2 350 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 HRKO00198 91 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 TNFRSF11BO00300 401 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 RNASET2O00584 256 aaKnown RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 KIAA0513O60268 411 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 HCN1O60741 890 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 CTNSO60931 367 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 SCN2BO60939 215 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 TMCC2O75069 709 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 LDB3O75112 727 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 CLEC3AO75596 197 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 ZFAND5O76080 213 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 CCNB2O95067 398 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 ADAP00813 363 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 HLA-DQB1P01920 261 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 RFPL3SP0C7P2 107 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 CCL3P10147 92 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 IL7P13232 177 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 HOXB4P17483 251 aaPredicted RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 CNR1P21554 472 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 CPN2P22792 545 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 CHMP24386 653 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 PSMA1P25786 263 aaKnown RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 NR4A2P43354 598 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 MAGEA5P43359 124 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 DNASE1L1P49184 302 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 SMIM11AP58511 58 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 SELENOWP63302 87 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 RNF4P78317 190 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 PSPHP78330 225 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 IGLV3-21P80748 117 aaPredicted RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 IL1RL1Q01638 556 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 ST3GAL4Q11206 333 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 IKZF1Q13422 519 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 DOC2AQ14183 400 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 ELAVL1Q15717 326 aaKnown RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 TAB1Q15750 504 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 SMN1Q16637 294 aaKnown RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 MICAQ29983 383 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 HYAL4Q2M3T9 481 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 GTDC1Q4AE62 458 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 GPAT3Q53EU6 434 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 SPIN4Q56A73 249 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 YIF1BQ5BJH7 314 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 SLC25A30Q5SVS4 291 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 FRG2Q64ET8 278 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 NOXRED1Q6NXP6 359 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 POMZP3Q6PJE2 187 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 SEM1Q6ZVN7 128 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 CREB3L2Q70SY1 520 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 TRILQ7L0X0 811 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 VASH1Q7L8A9 365 aaPredicted RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 NOXA1Q86UR1 476 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 ZNF595Q8IYB9 648 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 RDH10Q8IZV5 341 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 CLIP4Q8N3C7 705 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 LINC00471Q8N535 108 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 TBC1D19Q8N5T2 526 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 NATD1Q8N6N6 113 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 FAM83FQ8NEG4 500 aaPredicted RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 PROKR2Q8NFJ6 384 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 OR2L5Q8NG80 312 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 OR10G2Q8NGC3 310 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 OR5M9Q8NGP3 310 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 GOT1L1Q8NHS2 421 aaPredicted RBP5.35□□□□□ -1.55
USP3-212ENST00000559276 ZFAND1Q8TCF1 268 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 ZNF721Q8TF20 911 aa5.35□□□□□ -1.55
USP3-212ENST00000559276 ASB5Q8WWX0 329 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms