RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TMEM181Q9P2C4 612 aa15.05■□□□□ -0
LRRC28-210ENST00000558879 PRDM4Q9UKN5 801 aa15.05■□□□□ -0
LRRC28-210ENST00000558879 TRAPPC4Q9Y296 219 aa15.05■□□□□ -0
LRRC28-210ENST00000558879 TMED7Q9Y3B3 224 aa15.05■□□□□ -0
LRRC28-210ENST00000558879 CHST2Q9Y4C5 530 aa15.05■□□□□ -0
LRRC28-210ENST00000558879 PCDHB14Q9Y5E9 798 aa15.05■□□□□ -0
LRRC28-210ENST00000558879 HS3ST1O14792 307 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 POLR3GO15318 223 aaPredicted RBP15.04■□□□□ -0
LRRC28-210ENST00000558879 LYZL6O75951 148 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 IMPDH2P12268 514 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 PAX1P15863 534 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 IGHV1-2P23083 117 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 NTF4P34130 210 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 FADDQ13158 208 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 RPS26P11Q5JNZ5 115 aaPredicted RBP15.04■□□□□ -0
LRRC28-210ENST00000558879 C6orf10Q5SRN2 563 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 LRIF1Q5T3J3 769 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 SLC2A7Q6PXP3 512 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 PRSS57Q6UWY2 283 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 FUNDC1Q8IVP5 155 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 ZNF611Q8N823 705 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 OR52P1PQ8NH57 321 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 LILRB1Q8NHL6 650 aaPredicted RBP15.04■□□□□ -0
LRRC28-210ENST00000558879 LRRC8CQ8TDW0 803 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 HSD17B8Q92506 261 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 DDIT4LQ96D03 193 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 DNAJA3Q96EY1 480 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 RLIMQ9NVW2 624 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 MALT1Q9UDY8 824 aa15.04■□□□□ -0
LRRC28-210ENST00000558879 ZNF443Q9Y2A4 671 aaPredicted RBP15.04■□□□□ -0
LRRC28-210ENST00000558879 A0A096LPI6 279 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 ZC3H12DA2A288 527 aaKnown RBP15.03■□□□□ -0
LRRC28-210ENST00000558879 ARHGEF9O43307 516 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 TMCC2O75069 709 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 PGM3O95394 542 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 UQCRBP14927 111 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 IDH3AP50213 366 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 STX1BP61266 288 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 RGNQ15493 299 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 PRAMEF8Q5VWM4 474 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 PRAMEF7Q5VXH5 474 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 ATG4DQ86TL0 474 aaPredicted RBP15.03■□□□□ -0
LRRC28-210ENST00000558879 MSRB3Q8IXL7 192 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 ZNF775Q96BV0 537 aaPredicted RBP15.03■□□□□ -0
LRRC28-210ENST00000558879 C18orf12Q96KH6 178 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 CCDC28BQ9BUN5 200 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 GSX1Q9H4S2 264 aaPredicted RBP15.03■□□□□ -0
LRRC28-210ENST00000558879 SLC52A3Q9NQ40 469 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 SLC25A37Q9NYZ2 338 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 NOSIPQ9Y314 301 aaKnown RBP15.03■□□□□ -0
LRRC28-210ENST00000558879 RNF115Q9Y4L5 304 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 GMEB1Q9Y692 573 aa15.03■□□□□ -0
LRRC28-210ENST00000558879 TRBV5-3A0A0A0MS03 114 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 A0A0G2JPF8 293 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 HNRNPCL2B2RXH8 293 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 HNRNPCL3B7ZW38 293 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 GPR171O14626 319 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 HNRNPCL1O60812 293 aaKnown RBP15.02■□□□□ -0
LRRC28-210ENST00000558879 NUDT7P0C024 238 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 GKN3PP0CG01 181 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 HNRNPCL4P0DMR1 293 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 CCNA2P20248 432 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 PTH2RP49190 550 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 SLC35A1P78382 337 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 ZSWIM7Q19AV6 140 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 FBXW9Q5XUX1 488 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 BLOC1S3Q6QNY0 202 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 BIVMQ86UB2 503 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 P3H2Q8IVL5 708 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 CCDC103Q8IW40 242 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 ZNF433Q8N7K0 673 aaPredicted RBP15.02■□□□□ -0
LRRC28-210ENST00000558879 STON2Q8WXE9 905 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 APH1AQ96BI3 265 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 SPATA9Q9BWV2 254 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 RAD21L1Q9H4I0 556 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 BCL2L10Q9HD36 194 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 A4GALTQ9NPC4 353 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 NGBQ9NPG2 151 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 ZNF701Q9NV72 531 aaPredicted RBP15.02■□□□□ -0
LRRC28-210ENST00000558879 FLVCR1Q9Y5Y0 555 aa15.02■□□□□ -0
LRRC28-210ENST00000558879 TMEM229AB2RXF0 380 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 PDLIM1O00151 329 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 CLIC1O00299 241 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 EIF1BO60739 113 aaKnown RBP15.01□□□□□ -0.01
LRRC28-210ENST00000558879 ATP4BP51164 291 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 OR2B6P58173 313 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 SLC17A1Q14916 467 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 LARS2Q15031 903 aaKnown RBP15.01□□□□□ -0.01
LRRC28-210ENST00000558879 TIMM23BQ5SRD1 257 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 WBP2NLQ6ICG8 309 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 PAQR6Q6TCH4 344 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 SSX8Q7RTT4 187 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 ZNF100Q8IYN0 542 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 CLIP4Q8N3C7 705 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 GOLGA6L1Q8N7Z2 621 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 AKAP1Q92667 903 aaKnown RBP eCLIP15.01□□□□□ -0.01
LRRC28-210ENST00000558879 SLC35B4Q969S0 331 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 PERPQ96FX8 193 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 POM121Q96HA1 1249 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 COX4I2Q96KJ9 171 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms