RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 NINQ8N4C6 2090 aa11.29□□□□□ -0.6
SHMT2-230ENST00000557427 SIAH2O43255 324 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 REM1O75628 298 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 TRAPPC6AO75865 159 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 DIRAS1O95057 198 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 BCHEP06276 602 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 CD247P20963 164 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 RRM2P31350 389 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 RYKP34925 604 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 PPICP45877 212 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 EMDP50402 254 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 DAPP51397 102 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 TP53BP2Q13625 1128 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 MAPK11Q15759 364 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 HYAL4Q2M3T9 481 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 ANKRD34AQ69YU3 496 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 TNFAIP8L2Q6P589 184 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-230ENST00000557427 CYP4Z1Q86W10 505 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 MAPK1IP1LQ8NDC0 245 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 SETD9Q8NE22 299 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 OR4C15Q8NGM1 316 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 FBLIM1Q8WUP2 373 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 RASSF5Q8WWW0 418 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 HSPBAP1Q96EW2 488 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 TMEM19Q96HH6 336 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 DACH2Q96NX9 599 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 GNRHR2Q96P88 292 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 SECISBP2Q96T21 854 aaKnown RBP11.28□□□□□ -0.6
SHMT2-230ENST00000557427 PSD2Q9BQI7 771 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 YIPF3Q9GZM5 350 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 RBM38Q9H0Z9 239 aaKnown RBP11.28□□□□□ -0.6
SHMT2-230ENST00000557427 SERHL2Q9H4I8 314 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 ZCCHC3Q9NUD5 404 aaKnown RBP11.28□□□□□ -0.6
SHMT2-230ENST00000557427 EXD2Q9NVH0 621 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 JKAMPQ9P055 326 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 P2RX2Q9UBL9 471 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 LYVE1Q9Y5Y7 322 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 ENPP4Q9Y6X5 453 aa11.28□□□□□ -0.6
SHMT2-230ENST00000557427 NCKAP5O14513 1909 aa11.27□□□□□ -0.6
SHMT2-230ENST00000557427 ABCA1O95477 2261 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 TRGV5A0A0B4J1U4 118 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 ANKRD33BA6NCL7 494 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 LRRC3CA6NJW4 275 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 E9PQ18 207 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 GNB5O14775 395 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 EMC8O43402 210 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 TRIM3O75382 744 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-230ENST00000557427 PPM1BO75688 479 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 MFN2O95140 757 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 EPPINO95925 133 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 DRD5P21918 477 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 MATN1P21941 496 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 GDF1P27539 372 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 CASP3P42574 277 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 MASP1P48740 699 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 TMED10P49755 219 aaKnown RBP11.27□□□□□ -0.61
SHMT2-230ENST00000557427 HMGA2P52926 109 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 TPD52P55327 224 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-230ENST00000557427 GABARAPL2P60520 117 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 RPS26P62854 115 aaKnown RBP11.27□□□□□ -0.61
SHMT2-230ENST00000557427 RPP38P78345 283 aaKnown RBP11.27□□□□□ -0.61
SHMT2-230ENST00000557427 PRR5P85299 388 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 PLCXD2Q0VAA5 305 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 GNA13Q14344 377 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 TOMM20Q15388 145 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 CNPY1Q3B7I2 92 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 PRAMEF8Q5VWM4 474 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 PRAMEF7Q5VXH5 474 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 NUP54Q7Z3B4 507 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 C17orf47Q8NEP4 570 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 OR7G2Q8NG99 324 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 BBS10Q8TAM1 723 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 ZNF675Q8TD23 568 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 GIPC3Q8TF64 312 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 OMA1Q96E52 524 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 NODALQ96S42 347 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 ZNF607Q96SK3 696 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 TSC22D3Q99576 134 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 ANGPTL4Q9BY76 406 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 OR51I1Q9H343 314 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 METTL7AQ9H8H3 244 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 C3orf14Q9HBI5 128 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 BCL2L10Q9HD36 194 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 KIF17Q9P2E2 1029 aa11.27□□□□□ -0.61
SHMT2-230ENST00000557427 GPR55Q9Y2T6 319 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-230ENST00000557427 ARRDC5A6NEK1 342 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 PRAMEF25A6NGN4 478 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 KCNAB3O43448 404 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 HCN1O60741 890 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 MITFO75030 526 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-230ENST00000557427 SERPINB7O75635 380 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 SOX30O94993 753 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 SNX4O95219 450 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 IFNW1P05000 195 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 IFI6P09912 130 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 OR12D1P0DN82 309 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 ANXA8P13928 327 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 NAGAP17050 411 aa11.26□□□□□ -0.61
SHMT2-230ENST00000557427 RHCEP18577 417 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms