RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 AGKQ53H12 422 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 RNF220Q5VTB9 566 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 BLOC1S3Q6QNY0 202 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 Q6ZT83 130 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 GALNT5Q7Z7M9 940 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 SERPINA11Q86U17 422 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 ZNF100Q8IYN0 542 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 PIGXQ8TBF5 258 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 CKAP2Q8WWK9 683 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 DDIT4LQ96D03 193 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 OR10A4Q9H209 315 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 SLC52A3Q9NQ40 469 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 EMC3Q9P0I2 261 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 TMEM181Q9P2C4 612 aa13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 NOSIPQ9Y314 301 aaKnown RBP13.15□□□□□ -0.3
EFCAB11-207ENST00000555608 IGKV3D-15A0A087WSY6 115 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 NKX6-1P78426 367 aaPredicted RBP13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 HOXC5Q00444 222 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 FADDQ13158 208 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 ITGADQ13349 1161 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 CAPRIN1Q14444 709 aaKnown RBP13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 SQLEQ14534 574 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 LARS2Q15031 903 aaKnown RBP13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 LRIF1Q5T3J3 769 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 ZNF440Q8IYI8 595 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 NFKBIDQ8NI38 313 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 PMM1Q92871 262 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 MAGEB18Q96M61 343 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 SPATA9Q9BWV2 254 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 POTEKPQ9BYX7 375 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 RAD21L1Q9H4I0 556 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 IKZF5Q9H5V7 419 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 VIPAS39Q9H9C1 493 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 CACYBPQ9HB71 228 aaKnown RBP13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 A4GALTQ9NPC4 353 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 VAPAQ9P0L0 249 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 MTORP42345 2549 aa13.14□□□□□ -0.31
EFCAB11-207ENST00000555608 A0A0G2JPF8 293 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 HNRNPCL2B2RXH8 293 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 HNRNPCL3B7ZW38 293 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 C5orf58C9J3I9 102 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 ZNF208O43345 1280 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 HNRNPCL1O60812 293 aaKnown RBP13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 SMPD2O60906 423 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 RAD51DO75771 328 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 THBS1P07996 1170 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 HNRNPCL4P0DMR1 293 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 ARAFP10398 606 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 NCF2P19878 526 aaPredicted RBP13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 COX5AP20674 150 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 FPR1P21462 350 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 CXCR1P25024 350 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 HOXC12P31275 282 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 NTF4P34130 210 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 IDUAP35475 653 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 CLK1P49759 484 aaKnown RBP13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 ATP4BP51164 291 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 NR1H2P55055 460 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 FOXG1P55316 489 aaPredicted RBP13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 PDK3Q15120 406 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 OR7A5Q15622 319 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 ZNF311Q5JNZ3 666 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 Q5PR19 223 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 GCNT6Q5T4J0 391 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 SEZ6L2Q6UXD5 910 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 C20orf204Q6ZNR8 217 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 UBE2J2Q8N2K1 259 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 BBS10Q8TAM1 723 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 AKAP1Q92667 903 aaKnown RBP eCLIP13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 NEUROG1Q92886 237 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 APH1AQ96BI3 265 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 PERPQ96FX8 193 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 HDHD5Q9BXW7 423 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 ADAM19Q9H013 955 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 NPHS2Q9NP85 383 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 DLL4Q9NR61 685 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 THUMPD1Q9NXG2 353 aaKnown RBP13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 DCTN4Q9UJW0 460 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 ITPR3Q14573 2671 aa13.13□□□□□ -0.31
EFCAB11-207ENST00000555608 TRBV5-3A0A0A0MS03 114 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 CLOCKO15516 846 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 DNPH1O43598 174 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 BMP2P12643 396 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 SLC16A1P53985 500 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 COPZ1P61923 177 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 SLC35A1P78382 337 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 CEACAM7Q14002 265 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 P2RY6Q15077 328 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 NCMAPQ5T1S8 102 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 WBP2NLQ6ICG8 309 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 CASP12Q6UXS9 341 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 COMTD1Q86VU5 262 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 P3H2Q8IVL5 708 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 KBTBD8Q8NFY9 601 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 OR52E4Q8NGH9 312 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 C3orf49Q96BT1 292 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 POM121Q96HA1 1249 aa13.12□□□□□ -0.31
EFCAB11-207ENST00000555608 TMEM204Q9BSN7 226 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms