RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 NOSIPQ9Y314 301 aaKnown RBP12.22□□□□□ -0.45
PCNX4-209ENST00000555569 RNF115Q9Y4L5 304 aa12.22□□□□□ -0.45
PCNX4-209ENST00000555569 NIPBLQ6KC79 2804 aaeCLIP12.21□□□□□ -0.45
PCNX4-209ENST00000555569 DSPPQ9NZW4 1301 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 TMEM247A6NEH6 219 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 ZNF716A6NP11 495 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 GPR171O14626 319 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 TMCC2O75069 709 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 INHBBP09529 407 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 COX5AP20674 150 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 IGHV1-2P23083 117 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 ADSLP30566 484 aaPredicted RBP12.21□□□□□ -0.45
PCNX4-209ENST00000555569 PTH2RP49190 550 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 MAP2K6P52564 334 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 SLC16A1P53985 500 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 CRISP3P54108 245 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 STX1BP61266 288 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 SLC35A1P78382 337 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 STK11Q15831 433 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 ZNF836Q6ZNA1 936 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 CCDC103Q8IW40 242 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 LRRC8CQ8TDW0 803 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 SLC38A5Q8WUX1 472 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 Q96MF0 132 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 CXorf56Q9H5V9 222 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 ESRP2Q9H6T0 727 aaKnown RBP12.21□□□□□ -0.45
PCNX4-209ENST00000555569 RLIMQ9NVW2 624 aa12.21□□□□□ -0.45
PCNX4-209ENST00000555569 THUMPD1Q9NXG2 353 aaKnown RBP12.21□□□□□ -0.45
PCNX4-209ENST00000555569 ZNF443Q9Y2A4 671 aaPredicted RBP12.21□□□□□ -0.45
PCNX4-209ENST00000555569 PLCE1Q9P212 2302 aa12.21□□□□□ -0.46
PCNX4-209ENST00000555569 CDHR4A6H8M9 788 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 POLR3GO15318 223 aaPredicted RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 CLOCKO15516 846 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 EIF1BO60739 113 aaKnown RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 RAMP1O60894 148 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 TGDSO95455 350 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 TFPTP0C1Z6 253 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 GKN3PP0CG01 181 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 IMPDH2P12268 514 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 MRPL19P49406 292 aaKnown RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 H3F3AP84243 136 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 LARS2Q15031 903 aaKnown RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 PPA1Q15181 289 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 ZSWIM7Q19AV6 140 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 RPS26P11Q5JNZ5 115 aaPredicted RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 TIMM23BQ5SRD1 257 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 RNF220Q5VTB9 566 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 FBXW9Q5XUX1 488 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 ADAM5Q6NVV9 412 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 SEZ6L2Q6UXD5 910 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 UBE2J2Q8N2K1 259 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 ZNF433Q8N7K0 673 aaPredicted RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 LILRB1Q8NHL6 650 aaPredicted RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 GTF2H4Q92759 462 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 APH1AQ96BI3 265 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 MUCL1Q96DR8 90 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 POM121Q96HA1 1249 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 TMEM19Q96HH6 336 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 SMR3AQ99954 134 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 NAA11Q9BSU3 229 aaPredicted RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 ADAM19Q9H013 955 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 PAIP1Q9H074 479 aaKnown RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 RAD21L1Q9H4I0 556 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 CACYBPQ9HB71 228 aaKnown RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 SLCO1B3Q9NPD5 702 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 TCF7L2Q9NQB0 619 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 PRDM4Q9UKN5 801 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 PCDHB14Q9Y5E9 798 aa12.2□□□□□ -0.46
PCNX4-209ENST00000555569 HEATR1Q9H583 2144 aaKnown RBP12.2□□□□□ -0.46
PCNX4-209ENST00000555569 A0A0G2JPF8 293 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 ZC3H12DA2A288 527 aaKnown RBP12.19□□□□□ -0.46
PCNX4-209ENST00000555569 DPRXA6NFQ7 191 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 HNRNPCL2B2RXH8 293 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 HNRNPCL3B7ZW38 293 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 CLIC1O00299 241 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 HNRNPCL1O60812 293 aaKnown RBP12.19□□□□□ -0.46
PCNX4-209ENST00000555569 MRPL33O75394 65 aaKnown RBP12.19□□□□□ -0.46
PCNX4-209ENST00000555569 PGM3O95394 542 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 IGHV3-9P01782 118 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 THBS1P07996 1170 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 HNRNPCL4P0DMR1 293 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 PAX1P15863 534 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 GGT1P19440 569 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 CXCR1P25024 350 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 NTF4P34130 210 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 ACAA2P42765 397 aaKnown RBP12.19□□□□□ -0.46
PCNX4-209ENST00000555569 BSPH1Q075Z2 132 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 RGNQ15493 299 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 SLC2A7Q6PXP3 512 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 ATG4DQ86TL0 474 aaPredicted RBP12.19□□□□□ -0.46
PCNX4-209ENST00000555569 P2RY8Q86VZ1 359 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 LSRQ86X29 649 aaPredicted RBP12.19□□□□□ -0.46
PCNX4-209ENST00000555569 CLIP4Q8N3C7 705 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 FBXW5Q969U6 566 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 COX4I2Q96KJ9 171 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 ATP6V1G3Q96LB4 118 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 CCDC28BQ9BUN5 200 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 BDH2Q9BUT1 245 aa12.19□□□□□ -0.46
PCNX4-209ENST00000555569 SPATA9Q9BWV2 254 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms