RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 KPRPQ5T749 579 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-216ENST00000555550 GPR157Q5UAW9 335 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 SLC25A34Q6PIV7 304 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 GDPD3Q7L5L3 318 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 DPY19L4Q7Z388 723 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 FTMTQ8N4E7 242 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 KIR3DL3Q8N743 410 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF615Q8N8J6 731 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 ATP6V0D2Q8N8Y2 350 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 NPBQ8NG41 125 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 C14orf79Q96F83 325 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 SAMD8Q96LT4 415 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF578Q96N58 590 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-216ENST00000555550 TESK2Q96S53 571 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 SPIN2AQ99865 258 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 P2RY13Q9BPV8 354 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 SPIN2BQ9BPZ2 258 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 ING2Q9H160 280 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 SMYD3Q9H7B4 428 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 ECT2Q9H8V3 914 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 DMAP1Q9NPF5 467 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-216ENST00000555550 MOSPD1Q9UJG1 213 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 CLCA3PQ9Y6N3 262 aa2.02□□□□□ -2.09
SCFD1-216ENST00000555550 MROH7-TTC4A0A0A0MT08 1334 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 A0A0G2JN53 185 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 A0A0U1RQS6 177 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 A0A0U1RQV5 110 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 IDSB3KWA1 339 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 SDHDO14521 159 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 AGPAT2O15120 278 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 MSH4O15457 936 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 C6orf47O95873 294 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 HNF1AP20823 631 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 FMO3P31513 532 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 SHMT2P34897 504 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 NUCB2P80303 420 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 EWSR1Q01844 656 aaKnown RBP eCLIP2.01□□□□□ -2.09
SCFD1-216ENST00000555550 RIPK1Q13546 671 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 TIGD3Q6B0B8 471 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 NIPAL3Q6P499 406 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 LRRC8BQ6P9F7 803 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF709Q8N972 641 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 OR10G3Q8NGC4 313 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 OR52B4Q8NGK2 314 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 MGARPQ8TDB4 240 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 DTX3LQ8TDB6 740 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 MRPS31Q92665 395 aaKnown RBP2.01□□□□□ -2.09
SCFD1-216ENST00000555550 FRZBQ92765 325 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 TIMD4Q96H15 378 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 LINC00477Q96M19 166 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 POLR1EQ9GZS1 481 aaKnown RBP2.01□□□□□ -2.09
SCFD1-216ENST00000555550 NXF5Q9H1B4 397 aaKnown RBP2.01□□□□□ -2.09
SCFD1-216ENST00000555550 CDC42EP4Q9H3Q1 356 aaKnown RBP2.01□□□□□ -2.09
SCFD1-216ENST00000555550 SMPD3Q9NY59 655 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-216ENST00000555550 AATFQ9NY61 560 aaKnown RBP eCLIP2.01□□□□□ -2.09
SCFD1-216ENST00000555550 ATXN10Q9UBB4 475 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 LRP4O75096 1905 aa2.01□□□□□ -2.09
SCFD1-216ENST00000555550 SH3TC1Q8TE82 1336 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 IGLV2-18A0A075B6J9 118 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 IGHV1OR21-1A0A087WYE8 117 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 SS18L1O75177 396 aaPredicted RBP2□□□□□ -2.09
SCFD1-216ENST00000555550 CA1P00915 261 aaPredicted RBP2□□□□□ -2.09
SCFD1-216ENST00000555550 PPIAL4GP0DN37 164 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 CXCR2P25025 360 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF763Q0D2J5 394 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 PPP2R5CQ13362 524 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 GRB7Q14451 532 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 ABCA11PQ4W5N1 156 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 CTRB2Q6GPI1 263 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 FRMPD2BQ6IN97 320 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF836Q6ZNA1 936 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 C12orf56Q8IXR9 622 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 GCNT2Q8N0V5 402 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 OR5L2Q8NGL0 311 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 UBALD1Q8TB05 177 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 TAAR1Q96RJ0 339 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF2Q9BSG1 426 aaPredicted RBP2□□□□□ -2.09
SCFD1-216ENST00000555550 CLMPQ9H6B4 373 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 SIAEQ9HAT2 523 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 NUDT15Q9NV35 164 aa2□□□□□ -2.09
SCFD1-216ENST00000555550 FRMPD4Q14CM0 1322 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 G3V4G9 280 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 CLDN5O00501 218 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 RASGRF2O14827 1237 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 B4GALT5O43286 388 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 ANGPTL7O43827 346 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 RBBP9O75884 186 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 OR4F21O95013 312 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 CTDNEP1O95476 244 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 RHOXF2BP0C7M4 288 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF14P17017 642 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-216ENST00000555550 PGCP20142 388 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 GLP1RP43220 463 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 KIR2DS4P43632 304 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 ASMTP46597 345 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 DAP3P51398 398 aaKnown RBP1.99□□□□□ -2.09
SCFD1-216ENST00000555550 HSPA2P54652 639 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 DLX1P56177 255 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 ATP6AP1Q15904 470 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 RFX4Q33E94 735 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms