RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RPAP1Q9BWH6 1393 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-210ENST00000553455 ADAMTS9Q9P2N4 1935 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 DCTN6O00399 190 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 ZNF264O43296 627 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 TIMM8AO60220 97 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-210ENST00000553455 STAMBPO95630 424 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 LY6G6DO95868 133 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 SEC61GP60059 68 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 NDPQ00604 133 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 KYAT1Q16773 422 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 NSUN5P1Q3KNT7 163 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 CARD16Q5EG05 197 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 DMRTC1Q5HYR2 192 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 CNPY4Q8N129 248 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 OR52I1Q8NGK6 324 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 MAIP1Q8WWC4 291 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 ST8SIA1Q92185 356 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 UBE2E3Q969T4 207 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 C10orf35Q96D05 121 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 C16orf74Q96GX8 76 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 TIMD4Q96H15 378 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 CNOT6LQ96LI5 555 aaKnown RBP3.66□□□□□ -1.82
SYNE2-210ENST00000553455 RPRD1AQ96P16 312 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-210ENST00000553455 TECTBQ96PL2 329 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 RNF2Q99496 336 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 GCOM2Q9BZD3 368 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-210ENST00000553455 POLE4Q9NR33 117 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 MARCH5Q9NX47 278 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 HYPKQ9NX55 129 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 HPCAL4Q9UM19 191 aa3.66□□□□□ -1.82
SYNE2-210ENST00000553455 CROCCQ5TZA2 2017 aa3.65□□□□□ -1.82
SYNE2-210ENST00000553455 GFYI3L273 518 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 FOXE1O00358 373 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-210ENST00000553455 HDAC3O15379 428 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 POLR2DO15514 142 aaKnown RBP3.65□□□□□ -1.83
SYNE2-210ENST00000553455 PALMO75781 387 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 TSPAN12O95859 305 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 LGI1O95970 557 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 GNA11P29992 359 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 CCR1P32246 355 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 DDX39BQ13838 428 aaKnown RBP3.65□□□□□ -1.83
SYNE2-210ENST00000553455 ARL6IP1Q15041 203 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 ZMYND11Q15326 602 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 PHYHD1Q5SRE7 291 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 UQCC3Q6UW78 93 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 SCARA5Q6ZMJ2 495 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 TMEM179BQ7Z7N9 219 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 TRIM69Q86WT6 500 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 TMEM252Q8N6L7 170 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 OR9A1PQ8NGU1 263 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 C7orf33Q8WU49 177 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 OR1E3Q8WZA6 343 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 COPS8Q99627 209 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 ISG20L2Q9H9L3 353 aaKnown RBP3.65□□□□□ -1.83
SYNE2-210ENST00000553455 SGK2Q9HBY8 427 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 PLSCR3Q9NRY6 295 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 STAP1Q9ULZ2 295 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 ABCG2Q9UNQ0 655 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 UGT2A1Q9Y4X1 527 aa3.65□□□□□ -1.83
SYNE2-210ENST00000553455 TNRQ92752 1358 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 MED7O43513 233 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 CCDC130P13994 396 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 CALCRP30988 508 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 DDOSTP39656 456 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 RGRP47804 291 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 STX17P56962 302 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-210ENST00000553455 CDK16Q00536 496 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 DUSP7Q16829 419 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 KLHL38Q2WGJ6 581 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 FHL5Q5TD97 284 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 PGAP1Q75T13 922 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 VRK2Q86Y07 508 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 TGIF2LYQ8IUE0 185 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 TRPV1Q8NER1 839 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 FAM110BQ8TC76 370 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 MAGEE2Q8TD90 523 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-210ENST00000553455 OXGR1Q96P68 337 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 NICN1Q9BSH3 213 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 OR51J1Q9H342 316 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 RBKSQ9H477 322 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 REEP4Q9H6H4 257 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 SUDS3Q9H7L9 328 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-210ENST00000553455 ZDHHC11Q9H8X9 412 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 CD274Q9NZQ7 290 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 IL17CQ9P0M4 197 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 ZNF639Q9UID6 485 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 KIF25Q9UIL4 384 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 COPS3Q9UNS2 423 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 TTC21BQ7Z4L5 1316 aa3.64□□□□□ -1.83
SYNE2-210ENST00000553455 ZNF318Q5VUA4 2279 aa3.63□□□□□ -1.83
SYNE2-210ENST00000553455 IGHV1OR21-1A0A087WYE8 117 aa3.63□□□□□ -1.83
SYNE2-210ENST00000553455 A0A1B0GVL5 298 aa3.63□□□□□ -1.83
SYNE2-210ENST00000553455 TCRBV9S1A1TA0A576 114 aa3.63□□□□□ -1.83
SYNE2-210ENST00000553455 PCP4L1A6NKN8 68 aa3.63□□□□□ -1.83
SYNE2-210ENST00000553455 OR52A4PA6NMU1 304 aa3.63□□□□□ -1.83
SYNE2-210ENST00000553455 CLDN9O95484 217 aa3.63□□□□□ -1.83
SYNE2-210ENST00000553455 ZNF19P17023 458 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms