RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	MVK	Q03426	396 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	ZNF91	Q05481	1191 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	PMS2P3	Q13401	168 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	ZNF74	Q16587	644 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	ANKDD1A	Q495B1	522 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	SYT14P1	Q58G82	188 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	OR5M10	Q6IEU7	315 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	C5orf46	Q6UWT4	87 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	RTL4	Q6ZR62	310 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	TMPRSS7	Q7RTY8	843 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	DTX1	Q86Y01	620 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	ADGRG3	Q86Y34	549 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	GPALPP1	Q8IXQ4	340 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	STX19	Q8N4C7	294 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	TMEM156	Q8N614	296 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	IL22RA1	Q8N6P7	574 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	STK35	Q8TDR2	534 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	PAQR8	Q8TEZ7	354 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	MUL1	Q969V5	352 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	TMIGD2	Q96BF3	282 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	NTNG2	Q96CW9	530 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	LRR1	Q96L50	414 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	FRMD6	Q96NE9	622 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	ZNF582	Q96NG8	517 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	ANGPTL4	Q9BY76	406 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	RBM38	Q9H0Z9	239 aa	Known RBP	11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	FN3K	Q9H479	309 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	AMBN	Q9NP70	447 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	ASCL3	Q9NQ33	180 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	HPF1	Q9NWY4	346 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	GPR83	Q9NYM4	423 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	IL20RA	Q9UHF4	553 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	TMED7	Q9Y3B3	224 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	HRH3	Q9Y5N1	445 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	MYO15A	Q9UKN7	3530 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	CACNA1H	O95180	2353 aa		11.53	□□□□□ -0.56
CACNB3-223	ENST00000552480	VPS13A	Q96RL7	3174 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	SNTN	A6NMZ2	147 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480		A8MVM7	634 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	FAM47E-STBD1	D6RA91	191 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	LRRN3	E7EW58	273 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC30A4	O14863	429 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	PRODH	O43272	600 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	BGLAP	P02818	100 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	CCNA2	P20248	432 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	APOBEC1	P41238	236 aa	Known RBP	11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF41	P51814	821 aa	Predicted RBP	11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	MLLT10	P55197	1068 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	PRPS1	P60891	318 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	FOXK2	Q01167	660 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	EMX1	Q04741	257 aa	Predicted RBP	11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	RAB39A	Q14964	217 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC25A53	Q5H9E4	307 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	ARHGAP11A	Q6P4F7	1023 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	POMZP3	Q6PJE2	187 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	C10orf53	Q8N6V4	93 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	LRRC17	Q8N6Y2	441 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	FADS6	Q8N9I5	356 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	ANKK1	Q8NFD2	765 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR2M3	Q8NG83	312 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	KTI12	Q96EK9	354 aa	Predicted RBP	11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	THOC3	Q96J01	351 aa	Known RBP	11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	NDEL1	Q9GZM8	345 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	ENKD1	Q9H0I2	346 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	FKRP	Q9H9S5	495 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	NANS	Q9NR45	359 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	CMC2	Q9NRP2	79 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	IL17B	Q9UHF5	180 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF229	Q9UJW7	825 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	GPR52	Q9Y2T5	361 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	HEATR5A	Q86XA9	2040 aa		11.52	□□□□□ -0.57
CACNB3-223	ENST00000552480	WDFY4	Q6ZS81	3184 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	ANKRD33B	A6NCL7	494 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF99	A8MXY4	864 aa	Predicted RBP	11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	NPIPB7	O75200	414 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	DXO	O77932	396 aa	Known RBP	11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	PPP1R3D	O95685	299 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	FADS2	O95864	444 aa	Known RBP	11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	MT-ATP6	P00846	226 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	STS	P08842	583 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	ASAH2B	P0C7U1	165 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	CCL3	P10147	92 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	LIPC	P11150	499 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	DBT	P11182	482 aa	Known RBP	11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	MAP2K4	P45985	399 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	MASP1	P48740	699 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	NHLH1	Q02575	133 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	ST3GAL4	Q11206	333 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	FOXF1	Q12946	379 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	TUBA3C	Q13748	450 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	TBCE	Q15813	527 aa	Predicted RBP	11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	PLPPR5	Q32ZL2	321 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	ACER2	Q5QJU3	275 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	PRAMEF20	Q5VT98	475 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	AADACL4	Q5VUY2	407 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC22A10	Q63ZE4	541 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	GTF2IRD2B	Q6EKJ0	949 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms