RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SLITRK5O94991 958 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 KCNK2O95069 426 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 NKX2-2O95096 273 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 BCL10O95999 233 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 PNPP00491 289 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 C2P06681 752 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 ERCC1P07992 297 aaPredicted RBP4.64□□□□□ -1.67
HOXB3-213ENST00000552000 MSMBP08118 114 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 SAGP10523 405 aaPredicted RBP4.64□□□□□ -1.67
HOXB3-213ENST00000552000 ACP2P11117 423 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 PRKCAP17252 672 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 DDX5P17844 614 aaKnown RBP4.64□□□□□ -1.67
HOXB3-213ENST00000552000 ADRA2CP18825 462 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 CDH2P19022 906 aaPredicted RBP4.64□□□□□ -1.67
HOXB3-213ENST00000552000 TSPAN8P19075 237 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 DDCP20711 480 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 NTSP30990 170 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 TIA1P31483 386 aaKnown RBP eCLIP4.64□□□□□ -1.671e-6■■□□□ 13.6
HOXB3-213ENST00000552000 NTF4P34130 210 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 SLC1A3P43003 542 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 CCR4P51679 360 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 PRKAG1P54619 331 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 CDH13P55290 713 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 PRPS1P60891 318 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 IL1RL1Q01638 556 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 BTKQ06187 659 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 C2orf80Q0P641 193 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 SELENBP1Q13228 472 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 EFNB3Q15768 340 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 ADRM1Q16186 407 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 NDUFAF6Q330K2 333 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 CCNJQ5T5M9 372 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 FOXB2Q5VYV0 432 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 ABLIM2Q6H8Q1 611 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 METTL2BQ6P1Q9 378 aaKnown RBP4.64□□□□□ -1.67
HOXB3-213ENST00000552000 KLHL24Q6TFL4 600 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 IKBIPQ70UQ0 350 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 ZNF551Q7Z340 670 aaPredicted RBP4.64□□□□□ -1.67
HOXB3-213ENST00000552000 SZRD1Q7Z422 152 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 CARM1Q86X55 608 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 ZNF527Q8NB42 609 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 OR6Y1Q8NGX8 325 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 OR51F2Q8NH61 342 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 CEP70Q8NHQ1 597 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 RFWD2Q8NHY2 731 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 GPR119Q8TDV5 335 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 PYROXD1Q8WU10 500 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 C22orf15Q8WYQ4 148 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 ZNF524Q96C55 264 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 DNAJA3Q96EY1 480 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 OTUB1Q96FW1 271 aaPredicted RBP4.64□□□□□ -1.67
HOXB3-213ENST00000552000 APIPQ96GX9 242 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 AMDHD1Q96NU7 426 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 GPR78Q96P69 363 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 DUX5Q96PT3 197 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 QRSL1Q9H0R6 528 aaKnown RBP4.64□□□□□ -1.67
HOXB3-213ENST00000552000 PPCSQ9HAB8 311 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 DYNLRB1Q9NP97 96 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 UBQLN4Q9NRR5 601 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 DDX28Q9NUL7 540 aaKnown RBP4.64□□□□□ -1.67
HOXB3-213ENST00000552000 MED29Q9NX70 200 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 GIN1Q9NXP7 522 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 MALT1Q9UDY8 824 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 TAGLN3Q9UI15 199 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 ZNF225Q9UK10 706 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 CARD8Q9Y2G2 431 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 STAB2Q8WWQ8 2551 aa4.64□□□□□ -1.67
HOXB3-213ENST00000552000 DNAH9Q9NYC9 4486 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 TRAV20A0A0B4J274 112 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 IGHV1-18A0A0C4DH31 117 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 A0A1W2PQD3 144 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ZNF716A6NP11 495 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 PDLIM1O00151 329 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 GTPBP1O00178 669 aaKnown RBP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 SULT2B1O00204 365 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 GPR171O14626 319 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 WNT9BO14905 357 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 MRPL33O75394 65 aaKnown RBP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 SKAP2O75563 359 aaPredicted RBP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 PDE5AO76074 875 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 OR4F21O95013 312 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 KLHL2O95198 593 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 OTCP00480 354 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 CRYAAP02489 173 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 KRT6AP02538 564 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 TFP02787 698 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 KRT6BP04259 564 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 IGFBP1P08833 259 aaPredicted RBP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ADRA2AP08913 450 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 ANXA4P09525 319 aaPredicted RBP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 NUDT17P0C025 328 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 GAAP10253 952 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 PRPS2P11908 318 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 HSD3B1P14060 373 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 MAP3K8P41279 467 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 GPR6P46095 362 aaPredicted RBP4.63□□□□□ -1.67
HOXB3-213ENST00000552000 KRT6CP48668 564 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 DIO1P49895 249 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 KHKP50053 298 aa4.63□□□□□ -1.67
HOXB3-213ENST00000552000 HTR6P50406 440 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms