RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 PHF21BQ96EK2 531 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 SCRN2Q96FV2 425 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 ST6GAL2Q96JF0 529 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 CNDP1Q96KN2 507 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 NEDD4LQ96PU5 975 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 VPS35Q96QK1 796 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 NKX3-1Q99801 234 aaPredicted RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 TUBA1CQ9BQE3 449 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 WACQ9BTA9 647 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 PITPNM3Q9BZ71 974 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 POLR1EQ9GZS1 481 aaKnown RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 VPS37BQ9H9H4 285 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 TAAR2Q9P1P5 351 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 ATXN10Q9UBB4 475 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 RABL2AQ9UBK7 228 aaPredicted RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 FBXL4Q9UKA2 621 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 PRDM4Q9UKN5 801 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 POMT2Q9UKY4 750 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 OR51B4Q9Y5P0 310 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 SEC16AO15027 2179 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 GTF3C1Q12789 2109 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 CHD5Q8TDI0 1954 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 CMYA5Q8N3K9 4069 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 INTS1Q8N201 2190 aaKnown RBP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 NCOA6Q14686 2063 aaPredicted RBP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CHD3Q12873 2000 aaKnown RBP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CCDC88CQ9P219 2028 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 TRBV5-5A0A0J9YX44 114 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 A0A1W2PS18 150 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 TRIM49BA6NDI0 452 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 ZNF233A6NK53 670 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 SNURFLB1AK76 121 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 K7EQM0 130 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CCSO14618 274 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 ALOX15BO15296 676 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 TBX19O60806 448 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 ALOX12BO75342 701 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CDK2AP2O75956 126 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 TM7SF2O76062 418 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CALCAP01258 141 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 IGLV3-27P01718 113 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CALB2P22676 271 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 GIFP27352 417 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CEACAM8P31997 349 aaPredicted RBP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 SPAM1P38567 509 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 SLC6A8P48029 635 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 NDST2P52849 883 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 PLK1P53350 603 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 GAS1P54826 345 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 RPS15P62841 145 aaKnown RBP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 OTUD4Q01804 1114 aaKnown RBP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 SPIBQ01892 262 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 IL24Q13007 206 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CHIT1Q13231 466 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 IZUMO4Q1ZYL8 232 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 C1orf189Q5VU69 101 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 LIPJQ5W064 366 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 AWAT2Q6E213 333 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 IL17RELQ6ZVW7 336 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CHMP1BQ7LBR1 199 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 HPS6Q86YV9 775 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 ZDHHC21Q8IVQ6 265 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 GCNT2Q8N0V5 402 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 GPD1LQ8N335 351 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 FBXL16Q8N461 479 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 OR52M1Q8NGK5 317 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 UBA3Q8TBC4 463 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 RDH11Q8TC12 318 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CHPT1Q8WUD6 406 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 SLC5A11Q8WWX8 675 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 TMEM37Q8WXS4 190 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 SLC35C1Q96A29 364 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 IL17FQ96PD4 163 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 ACCSQ96QU6 501 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 ZNF607Q96SK3 696 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 PSMB7Q99436 277 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 TMEM204Q9BSN7 226 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 TBC1D10AQ9BXI6 508 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 CAPS2Q9BXY5 557 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 WWP1Q9H0M0 922 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 MED17Q9NVC6 651 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 TEX10Q9NXF1 929 aaPredicted RBP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 RDH8Q9NYR8 311 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 KLHL8Q9P2G9 620 aaPredicted RBP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 EPHA6Q9UF33 1036 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 ELF5Q9UKW6 265 aaPredicted RBP3.28□□□□□ -1.88
LIMA1-208ENST00000551691 ATG4BQ9Y4P1 393 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 SNX10Q9Y5X0 201 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 FKBP7Q9Y680 259 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 BIRC6Q9NR09 4857 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 LRP4O75096 1905 aa3.28□□□□□ -1.88
LIMA1-208ENST00000551691 IGLV9-49A0A0B4J1Y8 123 aa3.27□□□□□ -1.89
LIMA1-208ENST00000551691 A0A0D9SEW6 157 aa3.27□□□□□ -1.89
LIMA1-208ENST00000551691 CD8B2A6NJW9 211 aa3.27□□□□□ -1.89
LIMA1-208ENST00000551691 TMEM110-MUSTN1A8MSY1 372 aa3.27□□□□□ -1.89
LIMA1-208ENST00000551691 A8MX80 341 aa3.27□□□□□ -1.89
LIMA1-208ENST00000551691 C21orf140B9A014 251 aa3.27□□□□□ -1.89
LIMA1-208ENST00000551691 AP3B1O00203 1094 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms