RNA–Protein interactions for RNA: ENST00000550632.5

USP15-216, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-216ENST00000550632 ZMAT3Q9HA38 289 aaKnown RBP12.69□□□□□ -0.38
USP15-216ENST00000550632 SERINC1Q9NRX5 453 aa12.69□□□□□ -0.38
USP15-216ENST00000550632 PARPBPQ9NWS1 579 aa12.69□□□□□ -0.38
USP15-216ENST00000550632 CRNNQ9UBG3 495 aaPredicted RBP12.69□□□□□ -0.38
USP15-216ENST00000550632 MID2Q9UJV3 735 aa12.69□□□□□ -0.38
USP15-216ENST00000550632 IGHV2OR16-5A0A0B4J2B6 119 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 CCDC189A1A4V9 331 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 HMX2A2RU54 273 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 ETV2O00321 342 aaPredicted RBP12.68□□□□□ -0.38
USP15-216ENST00000550632 PIP5K1BO14986 540 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 SMIM24O75264 130 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 ULK1O75385 1050 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 DEAF1O75398 565 aaPredicted RBP12.68□□□□□ -0.38
USP15-216ENST00000550632 IGLV1-44P01699 117 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 ATP6V1C1P21283 382 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 DR1Q01658 176 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
USP15-216ENST00000550632 CBFBQ13951 182 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 MAD2L1BPQ15013 274 aaPredicted RBP12.68□□□□□ -0.38
USP15-216ENST00000550632 SLC9A3R2Q15599 337 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 TUSC1Q2TAM9 212 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 ATP6AP1LQ52LC2 224 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 SPDYAQ5MJ70 313 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 C1QTNF12Q5T7M4 302 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 BRICD5Q6PL45 260 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 SPATC1Q76KD6 591 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 SYT14Q8NB59 555 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 AURKBQ96GD4 344 aaPredicted RBP12.68□□□□□ -0.38
USP15-216ENST00000550632 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 RBM4BQ9BQ04 359 aaKnown RBP12.68□□□□□ -0.38
USP15-216ENST00000550632 OBP2BQ9NPH6 170 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 TMEM45AQ9NWC5 275 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 SLC9A8Q9Y2E8 581 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 SNX24Q9Y343 169 aa12.68□□□□□ -0.38
USP15-216ENST00000550632 POLR3HQ9Y535 204 aaPredicted RBP12.68□□□□□ -0.38
USP15-216ENST00000550632 M0R233 179 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 ZNF264O43296 627 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 SYNGR3O43761 229 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 CDC14BO60729 498 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 RP2O75695 350 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 PMS2P2O95744 297 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 CCNA2P20248 432 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 EFNA1P20827 205 aaPredicted RBP12.67□□□□□ -0.38
USP15-216ENST00000550632 DAG1Q14118 895 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 ZNF662Q6ZS27 426 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 METTL6Q8TCB7 284 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 BCL2L2Q92843 193 aaPredicted RBP12.67□□□□□ -0.38
USP15-216ENST00000550632 SYT3Q9BQG1 590 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 CTPS2Q9NRF8 586 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 OXSMQ9NWU1 459 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 CMAHPQ9Y471 501 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 TIMM22Q9Y584 194 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 SOX21Q9Y651 276 aaPredicted RBP12.67□□□□□ -0.38
USP15-216ENST00000550632 KCNE3Q9Y6H6 103 aa12.67□□□□□ -0.38
USP15-216ENST00000550632 PDPK1O15530 556 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 KRT33AO76009 404 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 TSPAN15O95858 294 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 UBL4AP11441 157 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 HMOX2P30519 316 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 KRTAP10-3P60369 221 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 MRPS25P82663 173 aaKnown RBP12.66□□□□□ -0.38
USP15-216ENST00000550632 NPRL3Q12980 569 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 EXOSC6Q5RKV6 272 aaKnown RBP12.66□□□□□ -0.38
USP15-216ENST00000550632 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 CYS1Q717R9 158 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 AAED1Q7RTV5 226 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 GSPT2Q8IYD1 628 aaKnown RBP12.66□□□□□ -0.38
USP15-216ENST00000550632 SLC25A43Q8WUT9 341 aaPredicted RBP12.66□□□□□ -0.38
USP15-216ENST00000550632 EGLN2Q96KS0 407 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 ZNF385AQ96PM9 386 aaKnown RBP12.66□□□□□ -0.38
USP15-216ENST00000550632 KCNA7Q96RP8 456 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 CITED1Q99966 193 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 MYEF2Q9P2K5 600 aaKnown RBP12.66□□□□□ -0.38
USP15-216ENST00000550632 JRKLQ9Y4A0 524 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 DTNAQ9Y4J8 743 aa12.66□□□□□ -0.38
USP15-216ENST00000550632 SCAMP2O15127 329 aaKnown RBP12.65□□□□□ -0.38
USP15-216ENST00000550632 IFI6P09912 130 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 NAT2P11245 290 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 TYK2P29597 1187 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 HSD17B3P37058 310 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 GSTM5P46439 218 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 ATP12AP54707 1039 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 LCN2P80188 198 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 CLCQ05315 142 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 SKP2Q13309 424 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 ZNF385BQ569K4 471 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 OTUD3Q5T2D3 398 aaPredicted RBP12.65□□□□□ -0.38
USP15-216ENST00000550632 LINGO2Q7L985 606 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 CCDC91Q7Z6B0 441 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 LRP11Q86VZ4 500 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 JAZF1Q86VZ6 243 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 ZIC4Q8N9L1 334 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 FAM110DQ8TAY7 271 aaPredicted RBP12.65□□□□□ -0.38
USP15-216ENST00000550632 ST8SIA1Q92185 356 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 BOD1Q96IK1 185 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 ALKBH3Q96Q83 286 aaPredicted RBP12.65□□□□□ -0.38
USP15-216ENST00000550632 ZNF416Q9BWM5 594 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 HOXD1Q9GZZ0 328 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 NELFAQ9H3P2 528 aa12.65□□□□□ -0.38
USP15-216ENST00000550632 MS4A5Q9H3V2 200 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms