RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 AMDHD2Q9Y303 409 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 ATP23Q9Y6H3 246 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 FAM157CP0CG43 387 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 TXNL4AP83876 142 aaKnown RBP20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 PDCD2Q16342 344 aaPredicted RBP20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 GABRA6Q16445 453 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 MAPK14Q16539 360 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 TMEM249Q2WGJ8 235 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 AP1ARQ63HQ0 302 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 KLHL24Q6TFL4 600 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 CASP12Q6UXS9 341 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 ADGRG3Q86Y34 549 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 TRIML2Q8N7C3 387 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 C1orf162Q8NEQ5 155 aaPredicted RBP20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 RAB8BQ92930 207 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 ARL5BQ96KC2 179 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 BEX2Q9BXY8 128 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 AKTIPQ9H8T0 292 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 LPAR3Q9UBY5 353 aa20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 MARCOQ9UEW3 520 aaPredicted RBP20.29■□□□□ 0.84
SMARCD1-209ENST00000550477 CENPVL1A0A0U1RR11 272 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 A0A1W2PR80 420 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 ELOA3DA6NLF2 546 aaPredicted RBP20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 H7C417 338 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 ZNF208O43345 1280 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 WNT11O96014 354 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 CCNA2P20248 432 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 ARRB2P32121 409 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 POLR2HP52434 150 aaKnown RBP20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 ELOA3BQ3SY89 546 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 C6orf52Q5T4I8 152 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 C11orf71Q6IPW1 123 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 OLIG3Q7RTU3 272 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 ABHD12BQ7Z5M8 362 aaPredicted RBP20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 ANKRD46Q86W74 232 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 CCDC103Q8IW40 242 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 ELOA3Q8NG57 546 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 PROX1Q92786 737 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 TESCQ96BS2 214 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 PPP1R36Q96LQ0 422 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 TMEM160Q9NX00 188 aa20.28■□□□□ 0.84
SMARCD1-209ENST00000550477 TMED7-TICAM2A0A0A6YYA0 188 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 GPRIN2O60269 458 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 PAX7P23759 505 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 APOBEC3AP31941 199 aaPredicted RBP20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 PRPS1P60891 318 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 VLDLRP98155 873 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 SAXO2Q658L1 398 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 CYB5R2Q6BCY4 276 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 EMBQ6PCB8 327 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 FRRS1Q6ZNA5 592 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 TRIM44Q96DX7 344 aaPredicted RBP20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 NEURL3Q96EH8 262 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 DNAJA3Q96EY1 480 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 SLC35A5Q9BS91 424 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 C1QTNF6Q9BXI9 259 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 OR11A1Q9GZK7 315 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 PRDM4Q9UKN5 801 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 TMED7Q9Y3B3 224 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 FBN3Q75N90 2809 aa20.27■□□□□ 0.84
SMARCD1-209ENST00000550477 IL7RP16871 459 aa20.26■□□□□ 0.83
SMARCD1-209ENST00000550477 S100A3P33764 101 aa20.26■□□□□ 0.83
SMARCD1-209ENST00000550477 EFNA4P52798 201 aa20.26■□□□□ 0.83
SMARCD1-209ENST00000550477 LRRC34Q8IZ02 419 aa20.26■□□□□ 0.83
SMARCD1-209ENST00000550477 OR52E4Q8NGH9 312 aa20.26■□□□□ 0.83
SMARCD1-209ENST00000550477 KCNS3Q9BQ31 491 aa20.26■□□□□ 0.83
SMARCD1-209ENST00000550477 RAP2CQ9Y3L5 183 aa20.26■□□□□ 0.83
SMARCD1-209ENST00000550477 SERPINE1P05121 402 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 ITGA5P08648 1049 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 LBPP18428 481 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 MPGP29372 298 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 RPL14P50914 215 aaKnown RBP20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 ABCE1P61221 599 aaKnown RBP20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 H3F3AP84243 136 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 LRRC74AQ0VAA2 488 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 CASP8Q14790 479 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 ZNF525Q8N782 197 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 TRNT1Q96Q11 434 aaKnown RBP20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 SHARPINQ9H0F6 387 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 MTHFD2LQ9H903 347 aaPredicted RBP20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 SLC17A5Q9NRA2 495 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 FLVCR1Q9Y5Y0 555 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 FKBP7Q9Y680 259 aa20.25■□□□□ 0.83
SMARCD1-209ENST00000550477 WDR91A4D1P6 747 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 SCN2BO60939 215 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 KRT33AO76009 404 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 SLC1A3P43003 542 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 PHC1P78364 1004 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 SPOCK1Q08629 439 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 CHI3L2Q15782 390 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 GSTA3Q16772 222 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 C9orf135Q5VTT2 229 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 PAQR6Q6TCH4 344 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 ZNF440Q8IYI8 595 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 ZNF781Q8N8C0 355 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 POMGNT2Q8NAT1 580 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 ZG16BQ96DA0 208 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 AMBRA1Q9C0C7 1298 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 PIF1Q9H611 641 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms