RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-211	ENST00000548247	PRKD3	O94806	890 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	C1QC	P02747	245 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	UBTFL6	P0CB48	400 aa	Predicted RBP	11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	EPHA3	P29320	983 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	IL12A	P29459	219 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SLC7A1	P30825	629 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GZMK	P49863	264 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	KHK	P50053	298 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	FUT5	Q11128	374 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TIGD2	Q4W5G0	525 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TYW3	Q6IPR3	259 aa	Known RBP	11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	MEX3D	Q86XN8	651 aa	Known RBP	11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	OIT3	Q8WWZ8	545 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ST8SIA1	Q92185	356 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ARL8A	Q96BM9	186 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ROPN1L	Q96C74	230 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PRR14	Q9BWN1	585 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SAP130	Q9H0E3	1048 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GP6	Q9HCN6	339 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	POLE3	Q9NRF9	147 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	CBLN4	Q9NTU7	201 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	KLHL13	Q9P2N7	655 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	WDR45	Q9Y484	360 aa		11.62	□□□□□ -0.55
RACGAP1-211	ENST00000548247	IGHV3-15	A0A0B4J1V0	119 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PRAMEF27	A3QJZ7	478 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	CCDC154	A6NI56	674 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TRPC5OS	A6NMA1	111 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	LYZL6	O75951	148 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	H6PD	O95479	791 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	KIT	P10721	976 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PGC	P20142	388 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ENPP1	P22413	925 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SLC18A1	P54219	525 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SESN3	P58005	492 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	RAC3	P60763	192 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	MAGOH	P61326	146 aa	Known RBP	11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SQLE	Q14534	574 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PPA1	Q15181	289 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	STK11	Q15831	433 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	AP1AR	Q63HQ0	302 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ATG16L1	Q676U5	607 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	C3orf33	Q6P1S2	294 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	C12orf54	Q6X4T0	127 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	FRRS1	Q6ZNA5	592 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	RNF130	Q86XS8	419 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TRIML2	Q8N7C3	387 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	FAM71C	Q8NEG0	241 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TMEM234	Q8WY98	164 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ZG16B	Q96DA0	208 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PANX1	Q96RD7	426 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ZBTB18	Q99592	522 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SERINC1	Q9NRX5	453 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ACER3	Q9NUN7	267 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	NKIRAS1	Q9NYS0	192 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SLC35A3	Q9Y2D2	325 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GPR45	Q9Y5Y3	372 aa		11.61	□□□□□ -0.55
RACGAP1-211	ENST00000548247	VWC2L	B2RUY7	222 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247		H7C417	338 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	HMGN4	O00479	90 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TCF21	O43680	179 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	BCAS1	O75363	584 aa	Predicted RBP	11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ERLIN1	O75477	346 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	YES1	P07947	543 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ITGA2	P17301	1181 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	EGR1	P18146	543 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	HNF1A	P20823	631 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	EDNRA	P25101	427 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PGM1	P36871	562 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	HPCA	P84074	193 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	CHRNE	Q04844	493 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SPOCK1	Q08629	439 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	MERTK	Q12866	999 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GGTLC2	Q14390	218 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GPAT3	Q53EU6	434 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	NXN	Q6DKJ4	435 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	B3GLCT	Q6Y288	498 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ZNF621	Q6ZSS3	439 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	HMGN2P46	Q86SG4	172 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SLC43A2	Q8N370	569 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	MUC15	Q8N387	334 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	RFLNB	Q8N5W9	214 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TLCD1	Q96CP7	247 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	OR5B2	Q96R09	309 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	OR52E6	Q96RD3	313 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	DHRS9	Q9BPW9	319 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	USB1	Q9BQ65	265 aa	Known RBP	11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	INPP5K	Q9BT40	448 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	KLHL9	Q9P2J3	617 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PRSS50	Q9UI38	385 aa		11.6	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SLCO1B7	G3V0H7	640 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GSN	P06396	782 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	RYK	P34925	604 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	APOBEC1	P41238	236 aa	Known RBP	11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	CDKN2C	P42773	168 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	EFNA4	P52798	201 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	KCNJ10	P78508	379 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms