RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 ICA1LQ8NDH6 482 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 DEFB124Q8NES8 71 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 OR4N2Q8NGD1 307 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 SLC22A8Q8TCC7 542 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 ADAMTS17Q8TE56 1095 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 METTL21AQ8WXB1 218 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 TFAP2CQ92754 450 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 OTUB1Q96FW1 271 aaPredicted RBP7.71□□□□□ -1.18
VPS29-203ENST00000546588 RMND5BQ96G75 393 aaPredicted RBP7.71□□□□□ -1.18
VPS29-203ENST00000546588 WFDC6Q9BQY6 131 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 KRTAP4-11Q9BYQ6 195 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 OR8D2Q9GZM6 311 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 ARMC7Q9H6L4 198 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 CRLF2Q9HC73 371 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 ASCL3Q9NQ33 180 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 UBQLN4Q9NRR5 601 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 PNO1Q9NRX1 252 aaKnown RBP7.71□□□□□ -1.18
VPS29-203ENST00000546588 MBNL3Q9NUK0 354 aaKnown RBP7.71□□□□□ -1.18
VPS29-203ENST00000546588 FBXO34Q9NWN3 711 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 SMPD3Q9NY59 655 aaPredicted RBP7.71□□□□□ -1.18
VPS29-203ENST00000546588 MKLN1Q9UL63 735 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 PADI1Q9ULC6 663 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 SLC35A3Q9Y2D2 325 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 SH3GLB1Q9Y371 365 aa7.71□□□□□ -1.18
VPS29-203ENST00000546588 MUC6Q6W4X9 2439 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 MYOCOSA0A1B0GUC4 107 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 PMS2P1A4D2B8 440 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ETV2O00321 342 aaPredicted RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 PEX12O00623 359 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 FZD7O75084 574 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 NME6O75414 186 aaPredicted RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 LYPD3O95274 346 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 DBHP09172 617 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ITGAMP11215 1152 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ANXA8P13928 327 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 HPGDP15428 266 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 IL7RP16871 459 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 FAHP16930 419 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 TNNI3P19429 210 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 SDHBP21912 280 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 CBLP22681 906 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ABCD3P28288 659 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 EVI2BP34910 448 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 PTGS2P35354 604 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 FOLR3P41439 243 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ACAA2P42765 397 aaKnown RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 OR1E2P47887 323 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ALDH6A1Q02252 535 aaKnown RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 NHLH1Q02575 133 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 IL18R1Q13478 541 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 RTP5Q14D33 572 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 Q3ZCU0 254 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 FLYWCH1Q4VC44 716 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 CCNJQ5T5M9 372 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 MRPL2Q5T653 305 aaKnown RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 LIN54Q6MZP7 749 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ZNF613Q6PF04 617 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 KIRREL2Q6UWL6 708 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 HSDL2Q6YN16 418 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 NUP54Q7Z3B4 507 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 STK32CQ86UX6 486 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 CYP4Z1Q86W10 505 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 VRK2Q86Y07 508 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 P3H2Q8IVL5 708 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ZNF440Q8IYI8 595 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 NLGN4YQ8NFZ3 816 aaPredicted RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 OR11G2Q8NGC1 345 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 OR10Q1Q8NGQ4 319 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 HGDQ93099 445 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 MR1Q95460 341 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 CCDC120Q96HB5 630 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 VPS50Q96JG6 964 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 HS6ST2Q96MM7 605 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ZNF570Q96NI8 536 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 SECISBP2Q96T21 854 aaKnown RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 PITX2Q99697 317 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 DGCR6LQ9BY27 220 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ADNPQ9H2P0 1102 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 POLR1BQ9H9Y6 1135 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 NMNAT1Q9HAN9 279 aaPredicted RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 C12orf10Q9HB07 376 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 HHATLQ9HCP6 504 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 SDHAF3Q9NRP4 125 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 KLHL28Q9NXS3 571 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 FOXJ2Q9P0K8 574 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 PISDQ9UG56 409 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 SAMHD1Q9Y3Z3 626 aaKnown RBP7.7□□□□□ -1.18
VPS29-203ENST00000546588 PCDHGB6Q9Y5F9 930 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 AP4B1Q9Y6B7 739 aa7.7□□□□□ -1.18
VPS29-203ENST00000546588 IGLV3-32A0A0A0MS00 114 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 A0A0B4J2E0 115 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 TEX51A0A1B0GUA7 166 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 A0A1B0GVC2 190 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 A0A1B0GX12 115 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 SH3PXD2BA1X283 911 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 HTR3EA5X5Y0 456 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 SERINC4A6NH21 518 aa7.69□□□□□ -1.18
VPS29-203ENST00000546588 SAC3D1A6NKF1 404 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms