RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 MAP2K6P52564 334 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 COPZ1P61923 177 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 SLC35A1P78382 337 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 ZSWIM7Q19AV6 140 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 TTMPQ5BVD1 217 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 RPS26P11Q5JNZ5 115 aaPredicted RBP16.61■□□□□ 0.25
TDG-208ENST00000544060 SLC2A7Q6PXP3 512 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 KRTAP1-3Q8IUG1 177 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 TMEM171Q8WVE6 324 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 GTF2H4Q92759 462 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 APH1AQ96BI3 265 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 TMEM19Q96HH6 336 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 NAA11Q9BSU3 229 aaPredicted RBP16.61■□□□□ 0.25
TDG-208ENST00000544060 ARMC7Q9H6L4 198 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 ZNF232Q9UNY5 417 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 RNF115Q9Y4L5 304 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 PCDHB14Q9Y5E9 798 aa16.61■□□□□ 0.25
TDG-208ENST00000544060 A0A0G2JPF8 293 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 HNRNPCL2B2RXH8 293 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 HNRNPCL3B7ZW38 293 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 HS3ST1O14792 307 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 CLOCKO15516 846 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 EIF1BO60739 113 aaKnown RBP16.6■□□□□ 0.25
TDG-208ENST00000544060 HNRNPCL1O60812 293 aaKnown RBP16.6■□□□□ 0.25
TDG-208ENST00000544060 CNOT4O95628 575 aaKnown RBP16.6■□□□□ 0.25
TDG-208ENST00000544060 CD3EP07766 207 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 THBS1P07996 1170 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 GKN3PP0CG01 181 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 HNRNPCL4P0DMR1 293 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 NCF2P19878 526 aaPredicted RBP16.6■□□□□ 0.25
TDG-208ENST00000544060 EDNRAP25101 427 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 CCDC103Q8IW40 242 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 CADM2Q8N3J6 435 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 AKAP1Q92667 903 aaKnown RBP eCLIP16.6■□□□□ 0.25
TDG-208ENST00000544060 MUCL1Q96DR8 90 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 EBF4Q9BQW3 602 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 TMEM204Q9BSN7 226 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 CCDC28BQ9BUN5 200 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 PAIP1Q9H074 479 aaKnown RBP16.6■□□□□ 0.25
TDG-208ENST00000544060 FREM1Q5H8C1 2179 aa16.6■□□□□ 0.25
TDG-208ENST00000544060 DSCAMO60469 2012 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 A0A096LPI6 279 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 C5orf58C9J3I9 102 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 CLIC1O00299 241 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 NR5A2O00482 541 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 MRPL33O75394 65 aaKnown RBP16.59■□□□□ 0.25
TDG-208ENST00000544060 IGHV3-9P01782 118 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 GGT1P19440 569 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 IGHV1-2P23083 117 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 ADSLP30566 484 aaPredicted RBP16.59■□□□□ 0.25
TDG-208ENST00000544060 MRPL19P49406 292 aaKnown RBP16.59■□□□□ 0.25
TDG-208ENST00000544060 SLC16A1P53985 500 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 AQP5P55064 265 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 FADDQ13158 208 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 PPA1Q15181 289 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 RGNQ15493 299 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 NCMAPQ5T1S8 102 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 RNF220Q5VTB9 566 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 FBXW9Q5XUX1 488 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 WBP2NLQ6ICG8 309 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 ZNF611Q8N823 705 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 C18orf12Q96KH6 178 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 CXorf56Q9H5V9 222 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 CCDC167Q9P0B6 97 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 PRDM4Q9UKN5 801 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 IFT52Q9Y366 437 aa16.59■□□□□ 0.25
TDG-208ENST00000544060 ZC3H12DA2A288 527 aaKnown RBP16.58■□□□□ 0.24
TDG-208ENST00000544060 HMGB1P1B2RPK0 211 aaPredicted RBP16.58■□□□□ 0.24
TDG-208ENST00000544060 GPIP06744 558 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 IMPDH2P12268 514 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 COX5AP20674 150 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 IDUAP35475 653 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 ZNF311Q5JNZ3 666 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 CASP12Q6UXS9 341 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 SSX8Q7RTT4 187 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 HDXQ7Z353 690 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 YTHDF3Q7Z739 585 aaKnown RBP16.58■□□□□ 0.24
TDG-208ENST00000544060 BIVMQ86UB2 503 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 SPDL1Q96EA4 605 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 SPATA9Q9BWV2 254 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 ADAM19Q9H013 955 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 GSX1Q9H4S2 264 aaPredicted RBP16.58■□□□□ 0.24
TDG-208ENST00000544060 A4GALTQ9NPC4 353 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 INTS9Q9NV88 658 aaKnown RBP16.58■□□□□ 0.24
TDG-208ENST00000544060 ARGLU1Q9NWB6 273 aaPredicted RBP16.58■□□□□ 0.24
TDG-208ENST00000544060 ASB6Q9NWX5 421 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 SLC9A8Q9Y2E8 581 aa16.58■□□□□ 0.24
TDG-208ENST00000544060 CIB4A0PJX0 185 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 CCT8L1PA6NM43 557 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 RAMP1O60894 148 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 NUDT7P0C024 238 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 ACAA2P42765 397 aaKnown RBP16.57■□□□□ 0.24
TDG-208ENST00000544060 PTH2RP49190 550 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 H3F3AP84243 136 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 BSPH1Q075Z2 132 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 TIMM23BQ5SRD1 257 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 PRAMEF8Q5VWM4 474 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 PRAMEF7Q5VXH5 474 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 BLOC1S3Q6QNY0 202 aa16.57■□□□□ 0.24
TDG-208ENST00000544060 PAQR6Q6TCH4 344 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms