RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 WDR5BQ86VZ2 330 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 MISPQ8IVT2 679 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 SYS1Q8N2H4 156 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 Q8N9G6 341 aaPredicted RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 FAM181AQ8N9Y4 354 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 FAM98AQ8NCA5 519 aaKnown RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 OR2T27Q8NH04 317 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 NAT6Q93015 286 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 TP53INP1Q96A56 240 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 KCNS3Q9BQ31 491 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 SLC7A5P2Q9GIP4 190 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 TOR4AQ9NXH8 423 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 DHCR7Q9UBM7 475 aaKnown RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 ALG1L2C9J202 215 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 TNFRSF10AO00220 468 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 PLPP2O43688 288 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 SERPINA3P01011 423 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 CD1AP06126 327 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 RPL4P36578 427 aaKnown RBP12.43□□□□□ -0.42
SMG6-203ENST00000536871 MTNR1BP49286 362 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 FABP5Q01469 135 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 HNRNPA0Q13151 305 aaKnown RBP12.43□□□□□ -0.42
SMG6-203ENST00000536871 FHL1Q13642 323 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 COL9A2Q14055 689 aaPredicted RBP12.43□□□□□ -0.42
SMG6-203ENST00000536871 PON3Q15166 354 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 NNATQ16517 81 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 BPHLQ86WA6 291 aaPredicted RBP12.43□□□□□ -0.42
SMG6-203ENST00000536871 MS4A15Q8N5U1 240 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 OR10H4Q8NGA5 316 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 CHAC2Q8WUX2 184 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 TMEM203Q969S6 136 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 CCDC74AQ96AQ1 378 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 TRMT61AQ96FX7 289 aaKnown RBP12.43□□□□□ -0.42
SMG6-203ENST00000536871 BARHL1Q9BZE3 327 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 ENKD1Q9H0I2 346 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 OR51V1Q9H2C8 321 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 ADGRL4Q9HBW9 690 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 NRIP3Q9NQ35 241 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 ZNF229Q9UJW7 825 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 HIF3AQ9Y2N7 669 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 REV3LO60673 3130 aa12.43□□□□□ -0.42
SMG6-203ENST00000536871 IGLV3-12A0A075B6K2 115 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 A0A1B0GTQ1 180 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 GABRPO00591 440 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 CTDSP2O14595 271 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 CASKO14936 926 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 RNF13O43567 381 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 HYAL3O43820 417 aaPredicted RBP12.42□□□□□ -0.42
SMG6-203ENST00000536871 CDC40O60508 579 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMG6-203ENST00000536871 REM1O75628 298 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 SLC16A1P53985 500 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 ZNF791Q3KP31 576 aaPredicted RBP12.42□□□□□ -0.42
SMG6-203ENST00000536871 SNAP47Q5SQN1 464 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 STEAP3Q658P3 488 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 XKRXQ6PP77 449 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 C5orf46Q6UWT4 87 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 SLC22A16Q86VW1 577 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 TPRA1Q86W33 373 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 KLBQ86Z14 1044 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 GDPD1Q8N9F7 314 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 POC5Q8NA72 575 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 OR4D9Q8NGE8 314 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 OR5M3Q8NGP4 307 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 NEIL3Q8TAT5 605 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 SMPDL3BQ92485 455 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 TSLPQ969D9 159 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 CNN2Q99439 309 aaKnown RBP12.42□□□□□ -0.42
SMG6-203ENST00000536871 KATNB1Q9BVA0 655 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 MOKQ9UQ07 419 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 TDRD6O60522 2096 aaKnown RBP12.42□□□□□ -0.42
SMG6-203ENST00000536871 TSPAN2O60636 221 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 PGCP20142 388 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 NRG3P56975 720 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 PLCXD2Q0VAA5 305 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 MRPL28Q13084 256 aaKnown RBP12.42□□□□□ -0.42
SMG6-203ENST00000536871 SRSF5Q13243 272 aaKnown RBP12.42□□□□□ -0.42
SMG6-203ENST00000536871 SHBQ15464 509 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 ZNF74Q16587 644 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 PMS2CLQ68D20 193 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 MARCH9Q86YJ5 346 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 OR52E2Q8NGJ4 325 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 OR5W2Q8NH69 310 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 ZNF563Q8TA94 476 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
SMG6-203ENST00000536871 TM9SF2Q99805 663 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 NUDT9Q9BW91 350 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 VN1R1Q9GZP7 353 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 WWTR1Q9GZV5 400 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 ADAM19Q9H013 955 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 NANSQ9NR45 359 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 MKL2Q9ULH7 1088 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 IER3IP1Q9Y5U9 82 aa12.42□□□□□ -0.42
SMG6-203ENST00000536871 OR2W5A6NFC9 320 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 ONECUT2O95948 504 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 DCNP07585 359 aaKnown RBP12.41□□□□□ -0.42
SMG6-203ENST00000536871 CD14P08571 375 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 NAT1P18440 290 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 DHPSP49366 369 aaPredicted RBP12.41□□□□□ -0.42
SMG6-203ENST00000536871 DIO1P49895 249 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms