RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 NPY6RQ99463 290 aa3.97□□□□□ -1.77
PRKDC-208ENST00000536710 KLHDC3Q9BQ90 382 aa3.97□□□□□ -1.77
PRKDC-208ENST00000536710 ROPN1BQ9BZX4 212 aaPredicted RBP3.97□□□□□ -1.77
PRKDC-208ENST00000536710 SLITRK2Q9H156 845 aa3.97□□□□□ -1.77
PRKDC-208ENST00000536710 EHD1Q9H4M9 534 aa3.97□□□□□ -1.77
PRKDC-208ENST00000536710 REEP4Q9H6H4 257 aa3.97□□□□□ -1.77
PRKDC-208ENST00000536710 YY1AP1Q9H869 796 aa3.97□□□□□ -1.77
PRKDC-208ENST00000536710 TMCO1Q9UM00 188 aa3.97□□□□□ -1.77
PRKDC-208ENST00000536710 CA5BQ9Y2D0 317 aa3.97□□□□□ -1.77
PRKDC-208ENST00000536710 FAM240BA0A1B0GVZ2 78 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 H0Y8G0 127 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 FOXE1O00358 373 aaPredicted RBP3.96□□□□□ -1.78
PRKDC-208ENST00000536710 PRKAB2O43741 272 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 UGT1A9O60656 530 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 RAMP3O60896 148 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 SRSF10O75494 262 aaKnown RBP3.96□□□□□ -1.78
PRKDC-208ENST00000536710 LYPD3O95274 346 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 CLDN9O95484 217 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 OXSR1O95747 527 aaPredicted RBP3.96□□□□□ -1.78
PRKDC-208ENST00000536710 TSPAN12O95859 305 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 IGHV3-23P01764 117 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 IGHG4P01861 327 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 SEMG1P04279 462 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 HSPB1P04792 205 aaKnown RBP3.96□□□□□ -1.78
PRKDC-208ENST00000536710 P0C879 139 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 ZBTB25P24278 435 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 CALCRP30988 508 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 QARSP47897 775 aaKnown RBP3.96□□□□□ -1.78
PRKDC-208ENST00000536710 DUSP3P51452 185 aaPredicted RBP3.96□□□□□ -1.78
PRKDC-208ENST00000536710 ACTR3P61158 418 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 LRRC74AQ0VAA2 488 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 ISXQ2M1V0 245 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 SAMD4BQ5PRF9 694 aaKnown RBP3.96□□□□□ -1.78
PRKDC-208ENST00000536710 CCDC183Q5T5S1 534 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 WDR74Q6RFH5 385 aaPredicted RBP3.96□□□□□ -1.78
PRKDC-208ENST00000536710 PGAP1Q75T13 922 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 NANOGNBQ7Z5D8 188 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 PPP1R27Q86WC6 154 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 TGIF2LXQ8IUE1 241 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 ALLCQ8N6M5 410 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 MTMR9Q96QG7 549 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 SMIM14Q96QK8 99 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 HOXC10Q9NYD6 342 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 TREM2Q9NZC2 230 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 CD274Q9NZQ7 290 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 SUN2Q9UH99 717 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 STAP1Q9ULZ2 295 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 IFT52Q9Y366 437 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 SMAD5-AS1Q9Y6J3 95 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 KANK1Q14678 1352 aa3.96□□□□□ -1.78
PRKDC-208ENST00000536710 PLEKHH1Q9ULM0 1364 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 TCRBV9S1A1TA0A576 114 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 HMMRO75330 724 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 IGKV3-15P01624 115 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 MX1P20591 662 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 SHMT2P34897 504 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 UGT1A5P35504 534 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 EPS15P42566 896 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 RPL23AP62750 156 aaKnown RBP3.95□□□□□ -1.78
PRKDC-208ENST00000536710 OGDHQ02218 1023 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 PLD1Q13393 1074 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 GRB7Q14451 532 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 NSUN5P1Q3KNT7 163 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 PRR30Q53SZ7 412 aaPredicted RBP3.95□□□□□ -1.78
PRKDC-208ENST00000536710 C1orf220Q5T0J3 134 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 OR52E8Q6IFG1 317 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 RUFY3Q7L099 469 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 TAS2R42Q7RTR8 314 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 VRK2Q86Y07 508 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 FTMTQ8N4E7 242 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 FAM83FQ8NEG4 500 aaPredicted RBP3.95□□□□□ -1.78
PRKDC-208ENST00000536710 OR52H1Q8NGJ2 320 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 AKR7LQ8NHP1 331 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 MAGEE2Q8TD90 523 aaPredicted RBP3.95□□□□□ -1.78
PRKDC-208ENST00000536710 NT5C3BQ969T7 300 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 TUBGCP3Q96CW5 907 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 MAGEB18Q96M61 343 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 NICN1Q9BSH3 213 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 TRIM62Q9BVG3 475 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 THUMPD1Q9NXG2 353 aaKnown RBP3.95□□□□□ -1.78
PRKDC-208ENST00000536710 DCDC2Q9UHG0 476 aa3.95□□□□□ -1.78
PRKDC-208ENST00000536710 RPL36Q9Y3U8 105 aaKnown RBP3.95□□□□□ -1.78
PRKDC-208ENST00000536710 ZFP92A6NM28 416 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 OR52A4PA6NMU1 304 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 DCTN6O00399 190 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 HAT1O14929 419 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 MBTPS2O43462 519 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 STAMBPO95630 424 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 PTGDSP41222 190 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 CDH4P55283 916 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 RPS14P62263 151 aaKnown RBP3.94□□□□□ -1.78
PRKDC-208ENST00000536710 ZNF45Q02386 682 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 ASPHQ12797 758 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 DUSP7Q16829 419 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 UNQ9370/PRO34162Q6UXP9 181 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 GDPD3Q7L5L3 318 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 FAM220AQ7Z4H9 259 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 ECHDC2Q86YB7 292 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 SLC22A9Q8IVM8 553 aa3.94□□□□□ -1.78
PRKDC-208ENST00000536710 C14orf178Q8N769 122 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms