RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 OR2B6P58173 313 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 NKX6-1P78426 367 aaPredicted RBP13.23□□□□□ -0.29
UBC-204ENST00000536661 PDK3Q15120 406 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 RGNQ15493 299 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 RNF220Q5VTB9 566 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 BLOC1S3Q6QNY0 202 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 SEZ6L2Q6UXD5 910 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 BHLHA15Q7RTS1 189 aaPredicted RBP13.23□□□□□ -0.29
UBC-204ENST00000536661 HDXQ7Z353 690 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 CCDC103Q8IW40 242 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 MSRB3Q8IXL7 192 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 ZNF440Q8IYI8 595 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 CLIP4Q8N3C7 705 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 GOLGA6L1Q8N7Z2 621 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 PIGXQ8TBF5 258 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 MAL2Q969L2 176 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 PIGTQ969N2 578 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 DDIT4LQ96D03 193 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 SPDL1Q96EA4 605 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 TMEM204Q9BSN7 226 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 POTEKPQ9BYX7 375 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 INTS9Q9NV88 658 aaKnown RBP13.23□□□□□ -0.29
UBC-204ENST00000536661 THUMPD1Q9NXG2 353 aaKnown RBP13.23□□□□□ -0.29
UBC-204ENST00000536661 CCDC167Q9P0B6 97 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 TMEM181Q9P2C4 612 aa13.23□□□□□ -0.29
UBC-204ENST00000536661 ROS1P08922 2347 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 ARID1AO14497 2285 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 A0A0G2JPF8 293 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 TMEM247A6NEH6 219 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 HNRNPCL2B2RXH8 293 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 HNRNPCL3B7ZW38 293 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 HNRNPCL1O60812 293 aaKnown RBP13.22□□□□□ -0.29
UBC-204ENST00000536661 HNRNPCL4P0DMR1 293 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 PRG2P13727 222 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 H2AFXP16104 143 aaPredicted RBP13.22□□□□□ -0.29
UBC-204ENST00000536661 IGHV1-2P23083 117 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 NTF4P34130 210 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 SLC16A1P53985 500 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 H3F3AP84243 136 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 FADDQ13158 208 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 LARS2Q15031 903 aaKnown RBP13.22□□□□□ -0.29
UBC-204ENST00000536661 PAGE3Q5JUK9 113 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 LRIF1Q5T3J3 769 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 ATG4DQ86TL0 474 aaPredicted RBP13.22□□□□□ -0.29
UBC-204ENST00000536661 ZNF100Q8IYN0 542 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 C10orf111Q8N326 155 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 CADM2Q8N3J6 435 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 ADAM19Q9H013 955 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 RAD21L1Q9H4I0 556 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 A4GALTQ9NPC4 353 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 SLC52A3Q9NQ40 469 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 SLAMF8Q9P0V8 285 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 TRAPPC4Q9Y296 219 aa13.22□□□□□ -0.29
UBC-204ENST00000536661 NOSIPQ9Y314 301 aaKnown RBP13.22□□□□□ -0.29
UBC-204ENST00000536661 CNOT4O95628 575 aaKnown RBP13.21□□□□□ -0.29
UBC-204ENST00000536661 IGHV3-9P01782 118 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 SLC35A1P78382 337 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 CAPRIN1Q14444 709 aaKnown RBP13.21□□□□□ -0.29
UBC-204ENST00000536661 Q5PR19 223 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 SHEQ5VZ18 495 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 WBP2NLQ6ICG8 309 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 SERPINA11Q86U17 422 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 LRRC75A-AS1Q8N1F1 130 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 CKAP2Q8WWK9 683 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 IGFBPL1Q8WX77 278 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 HSD17B8Q92506 261 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 APH1AQ96BI3 265 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 THOC1Q96FV9 657 aaKnown RBP13.21□□□□□ -0.29
UBC-204ENST00000536661 SPATA9Q9BWV2 254 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 GSX1Q9H4S2 264 aaPredicted RBP13.21□□□□□ -0.29
UBC-204ENST00000536661 VIPAS39Q9H9C1 493 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 BCL2L10Q9HD36 194 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 ARGLU1Q9NWB6 273 aaPredicted RBP13.21□□□□□ -0.29
UBC-204ENST00000536661 VAPAQ9P0L0 249 aa13.21□□□□□ -0.29
UBC-204ENST00000536661 TRBV5-3A0A0A0MS03 114 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 GPR171O14626 319 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 HS3ST1O14792 307 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 ARAFP10398 606 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 CXCR1P25024 350 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 ADSLP30566 484 aaPredicted RBP13.2□□□□□ -0.3
UBC-204ENST00000536661 IDUAP35475 653 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 ATP4BP51164 291 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 MAP2K6P52564 334 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 BNIP2Q12982 314 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 SQLEQ14534 574 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 STK11Q15831 433 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 ZSWIM7Q19AV6 140 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 AGKQ53H12 422 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 NCMAPQ5T1S8 102 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 PRAMEF8Q5VWM4 474 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 PRAMEF7Q5VXH5 474 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 FBXW9Q5XUX1 488 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 P3H2Q8IVL5 708 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 ZNF433Q8N7K0 673 aaPredicted RBP13.2□□□□□ -0.3
UBC-204ENST00000536661 BBS10Q8TAM1 723 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 AKAP1Q92667 903 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBC-204ENST00000536661 PERPQ96FX8 193 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 POM121Q96HA1 1249 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 MAGEB18Q96M61 343 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 USB1Q9BQ65 265 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms