RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 MT-ND4P03905 459 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 GABRG2P18507 467 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 ERP29P30040 261 aaKnown RBP11.51□□□□□ -0.57
RAD50-209ENST00000533482 E2F1Q01094 437 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 OXA1LQ15070 435 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 OR7A5Q15622 319 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 C8orf82Q6P1X6 216 aaPredicted RBP11.51□□□□□ -0.57
RAD50-209ENST00000533482 SYT9Q86SS6 491 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 BBS1Q8NFJ9 593 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 OR5B2Q96R09 309 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 OR6C1Q96RD1 312 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 SDF2Q99470 211 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 PITX2Q99697 317 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 PHF7Q9BWX1 381 aaPredicted RBP11.51□□□□□ -0.57
RAD50-209ENST00000533482 GABARAPL1Q9H0R8 117 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 MCCC2Q9HCC0 563 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 GSKIPQ9P0R6 139 aa11.51□□□□□ -0.57
RAD50-209ENST00000533482 OR2AT4A6NND4 320 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 FRKP42685 505 aaPredicted RBP11.5□□□□□ -0.57
RAD50-209ENST00000533482 RAB38P57729 211 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 AGAP7PQ5VUJ5 663 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 ZNF836Q6ZNA1 936 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 MED25Q71SY5 747 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 NOXA1Q86UR1 476 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 KDM8Q8N371 416 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 COQ8AQ8NI60 647 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 NXPE2Q96DL1 559 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 SLC6A7Q99884 636 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 FOLH1BQ9HBA9 442 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 PPIL1Q9Y3C6 166 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 SPEF1Q9Y4P9 236 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 ZSCAN5BA6NJL1 495 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 SYT5O00445 386 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 PRPH2P23942 346 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 HOXD12P35452 270 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 UGT2B10P36537 528 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 PRPS1P60891 318 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 EEF1A2Q05639 463 aaKnown RBP11.5□□□□□ -0.57
RAD50-209ENST00000533482 P2RY14Q15391 338 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 NKPD1Q17RQ9 610 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 ZNF440Q8IYI8 595 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 SLAMF7Q9NQ25 335 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 UBQLN4Q9NRR5 601 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 COQ3Q9NZJ6 369 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 ZFC3H1O60293 1989 aaKnown RBP11.5□□□□□ -0.57
RAD50-209ENST00000533482 OR14I1A6ND48 311 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 SCRG1O75711 98 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 CHRNB1P11230 501 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 ATF4P18848 351 aaPredicted RBP11.5□□□□□ -0.57
RAD50-209ENST00000533482 COL9A1P20849 921 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 PRKAR1BP31321 381 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 GNG2P59768 71 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 OTPQ5XKR4 325 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 FCRLAQ7L513 359 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 PPP1R3BQ86XI6 285 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 FTMTQ8N4E7 242 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 NANOGP1Q8N7R0 232 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 PNLDC1Q8NA58 520 aaKnown RBP11.5□□□□□ -0.57
RAD50-209ENST00000533482 LINC01555Q8NAE3 123 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 LSM14AQ8ND56 463 aaKnown RBP11.5□□□□□ -0.57
RAD50-209ENST00000533482 NPRL2Q8WTW4 380 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 NEDD4LQ96PU5 975 aa11.5□□□□□ -0.57
RAD50-209ENST00000533482 METTL8Q9H825 291 aaKnown RBP11.5□□□□□ -0.57
RAD50-209ENST00000533482 LRRTM2O43300 516 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 RBMXL2O75526 392 aaKnown RBP11.49□□□□□ -0.57
RAD50-209ENST00000533482 SOX18P35713 384 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 SNRPGP62308 76 aaKnown RBP11.49□□□□□ -0.57
RAD50-209ENST00000533482 RACK1P63244 317 aaKnown RBP11.49□□□□□ -0.57
RAD50-209ENST00000533482 DEFA5Q01523 94 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 SNTA1Q13424 505 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 OR7E24Q6IFN5 339 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 LRRC56Q8IYG6 542 aaPredicted RBP11.49□□□□□ -0.57
RAD50-209ENST00000533482 C15orf40Q8WUR7 153 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 CREB3L1Q96BA8 519 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 PDCD1LG2Q9BQ51 273 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 ARL6Q9H0F7 186 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 CST11Q9H112 138 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 SEMA6CQ9H3T2 930 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 KLHL21Q9UJP4 597 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 SCP2D1Q9UJQ7 156 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 CACNG2Q9Y698 323 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 TRBV11-1A0A0K0K1C0 115 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 PLRG1O43660 514 aaKnown RBP11.49□□□□□ -0.57
RAD50-209ENST00000533482 CSTBP04080 98 aaKnown RBP11.49□□□□□ -0.57
RAD50-209ENST00000533482 TBC1D25Q3MII6 688 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 CDNFQ49AH0 187 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 NXNL2Q5VZ03 156 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 TMEM92Q6UXU6 159 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 ZNF793Q6ZN11 406 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 ETFBKMTQ8IXQ9 262 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 SLC22A8Q8TCC7 542 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 PCNPQ8WW12 178 aaKnown RBP11.49□□□□□ -0.57
RAD50-209ENST00000533482 TEX101Q9BY14 249 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 STRADBQ9C0K7 418 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 GAREM1Q9H706 876 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 SLC6A20Q9NP91 592 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 ANKRD10Q9NXR5 420 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 PISDQ9UG56 409 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 NBASA2RRP1 2371 aa11.49□□□□□ -0.57
RAD50-209ENST00000533482 LIPCP11150 499 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms