RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 MTERF4Q7Z6M4 381 aaKnown RBP7.06□□□□□ -1.28
CD44-232ENST00000531118 MYPOPQ86VE0 399 aaPredicted RBP7.06□□□□□ -1.28
CD44-232ENST00000531118 ZDHHC13Q8IUH4 622 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 SLC16A11Q8NCK7 471 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 OR4F15Q8NGB8 312 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 OR6Y1Q8NGX8 325 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 CEP70Q8NHQ1 597 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 CDC26Q8NHZ8 85 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 PIGXQ8TBF5 258 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 PHOSPHO1Q8TCT1 267 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 C16orf78Q8WTQ4 265 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 CDKL2Q92772 493 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 YIPF5Q969M3 257 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 ELP4Q96EB1 424 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 ZNF48Q96MX3 618 aaPredicted RBP7.06□□□□□ -1.28
CD44-232ENST00000531118 CITED1Q99966 193 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 RBM4BQ9BQ04 359 aaKnown RBP7.06□□□□□ -1.28
CD44-232ENST00000531118 QRSL1Q9H0R6 528 aaKnown RBP7.06□□□□□ -1.28
CD44-232ENST00000531118 GLIPR2Q9H4G4 154 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 UBQLN4Q9NRR5 601 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 CRNNQ9UBG3 495 aaPredicted RBP7.06□□□□□ -1.28
CD44-232ENST00000531118 UPB1Q9UBR1 384 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 CARD8Q9Y2G2 431 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 SH3PXD2BA1X283 911 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 E7ESA3 106 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 SULT2B1O00204 365 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 PGRMC1O00264 195 aaKnown RBP7.05□□□□□ -1.28
CD44-232ENST00000531118 TIMM23O14925 209 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 PPIHO43447 177 aaKnown RBP7.05□□□□□ -1.28
CD44-232ENST00000531118 PLPP2O43688 288 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 RP2O75695 350 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 NCR1O76036 304 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 TSPAN15O95858 294 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 KNG1P01042 644 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 IGLV1-44P01699 117 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 ZNF75DP51815 510 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 ETF1P62495 437 aaKnown RBP7.05□□□□□ -1.28
CD44-232ENST00000531118 HGFACQ04756 655 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 ZNF763Q0D2J5 394 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 QPRTQ15274 297 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 BEAN1Q3B7T3 259 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 TBRG1Q3YBR2 411 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 SYT14P1Q58G82 188 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 CCNJQ5T5M9 372 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 TSPO2Q5TGU0 170 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 ACSM5Q6NUN0 579 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 TMPPEQ6ZT21 453 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 SPATC1Q76KD6 591 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 MTDHQ86UE4 582 aaKnown RBP7.05□□□□□ -1.28
CD44-232ENST00000531118 RIBC1Q8N443 379 aaPredicted RBP7.05□□□□□ -1.28
CD44-232ENST00000531118 MMGT1Q8N4V1 131 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 TMCO5AQ8N6Q1 288 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 CDRT4Q8N9R6 151 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 GPR119Q8TDV5 335 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 RDH5Q92781 318 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 SLC25A28Q96A46 364 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 RAB39BQ96DA2 213 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 ZHX1-C8orf76Q96EF9 292 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 OTUB1Q96FW1 271 aaPredicted RBP7.05□□□□□ -1.28
CD44-232ENST00000531118 AMDHD1Q96NU7 426 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 ANKRD27Q96NW4 1050 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 MS4A4EQ96PG1 132 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 NMRK1Q9NWW6 199 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 VPS29Q9UBQ0 182 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 ADAM30Q9UKF2 790 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 NFU1Q9UMS0 254 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 SNX6Q9UNH7 406 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 SLC9A8Q9Y2E8 581 aa7.05□□□□□ -1.28
CD44-232ENST00000531118 TANC2Q9HCD6 1990 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 NOTCH3Q9UM47 2321 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 ARPC4-TTLL3A0A0A6YYG9 625 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 CCDC189A1A4V9 331 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 FAM159BA6NKW6 160 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 SLC22A31A6NKX4 558 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 CLDN34H7C241 214 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 M0R233 179 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 F13BP05160 661 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 RPS17P08708 135 aaKnown RBP7.04□□□□□ -1.28
CD44-232ENST00000531118 PRPS2P11908 318 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 HSD3B1P14060 373 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 ANPEPP15144 967 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 CHN1P15882 459 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 CDH2P19022 906 aaPredicted RBP7.04□□□□□ -1.28
CD44-232ENST00000531118 OMGP23515 440 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 HSD3B2P26439 372 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 CRABP2P29373 138 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 SPRP35270 261 aaPredicted RBP7.04□□□□□ -1.28
CD44-232ENST00000531118 ASMTP46597 345 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 CCR4P51679 360 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 TUBA1BP68363 451 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 TUBA4AP68366 448 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 ACSM2AQ08AH3 577 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 HSPB3Q12988 150 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 SNTB2Q13425 540 aaKnown RBP7.04□□□□□ -1.28
CD44-232ENST00000531118 DUSP5Q16690 384 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 FAM83EQ2M2I3 478 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 C3orf36Q3SXR2 165 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 TIGD2Q4W5G0 525 aa7.04□□□□□ -1.28
CD44-232ENST00000531118 SPIN4Q56A73 249 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms