RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 HOXB9P17482 250 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 PER3P56645 1201 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 RPS15AP62244 130 aaKnown RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 MALLQ13021 153 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 RAB33AQ14088 237 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 MLC1Q15049 377 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 MANEALQ5VSG8 457 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 UNC5DQ6UXZ4 953 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF704Q6ZNC4 412 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 TMPPEQ6ZT21 453 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 PGAP1Q75T13 922 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 LIX1LQ8IVB5 337 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF808Q8N4W9 903 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 OR13C2Q8NGS9 318 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 RNF141Q8WVD5 230 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 MIB2Q96AX9 1013 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 MS4A4EQ96PG1 132 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 PAPOLGQ9BWT3 736 aaKnown RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 CDCP1Q9H5V8 836 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 TP53TG5Q9Y2B4 290 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 MED16Q9Y2X0 877 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 KLK4Q9Y5K2 254 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 NPIPB15A6NHN6 443 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 KDM4EB2RXH2 506 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 APOA2P02652 100 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 HRH2P25021 359 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 CD70P32970 193 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 VASPP50552 380 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 HBMQ6B0K9 141 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 VASH1Q7L8A9 365 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 GLCCI1Q86VQ1 547 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 HSD17B11Q8NBQ5 300 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 RBMXL1Q96E39 390 aaKnown RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 ATOH8Q96SQ7 321 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 ZIC5Q96T25 663 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 ELOVL3Q9HB03 270 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 GAB2Q9UQC2 676 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 CBY1Q9Y3M2 126 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 H7C1C5 153 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 P2RX6O15547 441 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 SLC16A7O60669 478 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF780AO75290 641 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 SYNGR4O95473 234 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF888P0CJ79 500 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 HOXD11P31277 338 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 DHPSP49366 369 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 LCN6P62502 163 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 GPLD1P80108 840 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 TESK1Q15569 626 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 KIAA0319Q5VV43 1072 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 SLX4IPQ5VYV7 408 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 TMEM88Q6PEY1 159 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 SLC51BQ86UW2 128 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 OR4K15Q8NH41 348 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 RNF128Q8TEB7 428 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 SCARB1Q8WTV0 552 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 BRI3BPQ8WY22 251 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 TM9SF4Q92544 642 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 BORCS7Q96B45 105 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF582Q96NG8 517 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 CPPED1Q9BRF8 314 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 SYT11Q9BT88 431 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 DEFB126Q9BYW3 111 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 STARD5Q9NSY2 213 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 FAM212BQ9NTI7 297 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 VDAC3Q9Y277 283 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 SCAF4O95104 1147 aaKnown RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 CPNE6O95741 557 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 F13BP05160 661 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 XCR1P46094 333 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 OR2B8PP59922 312 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 TLE1Q04724 770 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 EXOSC7Q15024 291 aaKnown RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 RPE65Q16518 533 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 SFRP5Q5T4F7 317 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 PM20D1Q6GTS8 502 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 MAMDC4Q6UXC1 1216 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 NDUFAF7Q7L592 441 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 TPRA1Q86W33 373 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 UEVLDQ8IX04 471 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 GPR137CQ8N3F9 429 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 TTC9BQ8N6N2 239 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 BSCL2Q96G97 398 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-223ENST00000529986 PSD2Q9BQI7 771 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 RTP3Q9BQQ7 232 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 MRI1Q9BV20 369 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 GSX2Q9BZM3 304 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 FKRPQ9H9S5 495 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 UFSP2Q9NUQ7 469 aa7.13□□□□□ -1.27
CTNND1-223ENST00000529986 OR2A25A4D2G3 310 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 GRXCR2A6NFK2 248 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 OR6C76A6NM76 312 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 H3BUI4 141 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 RAB40ALP0C0E4 278 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 BMP1P13497 986 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF28P17035 718 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF43P17038 809 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 NAT1P18440 290 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 ITGB8P26012 769 aa7.12□□□□□ -1.27
CTNND1-223ENST00000529986 SRYQ05066 204 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms