RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ELOVL7A1L3X0 281 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 ETV2O00321 342 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-204ENST00000526430 AP3D1O14617 1153 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 ZNF264O43296 627 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 EIF4E2O60573 245 aaKnown RBP9.77□□□□□ -0.85
NEDD8-204ENST00000526430 OPN1SWP03999 348 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 THBS1P07996 1170 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 NCK1P16333 377 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 KDELR2P33947 212 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 KCNJ5P48544 419 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 P2RX1P51575 399 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 GFRA1P56159 465 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 CLDN15P56746 228 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 RNF220Q5VTB9 566 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 ERICH5Q6P6B1 374 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 DHRS4L2Q6PKH6 230 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 PLEKHM3Q6ZWE6 761 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 PM20D2Q8IYS1 436 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 MAPK1IP1LQ8NDC0 245 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 FAM83FQ8NEG4 500 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-204ENST00000526430 B4GALNT2Q8NHY0 566 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 TMEM171Q8WVE6 324 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 C1GALT1C1Q96EU7 318 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 SH3YL1Q96HL8 342 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-204ENST00000526430 CLPTM1LQ96KA5 538 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 ZNF597Q96LX8 424 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 CADM1Q9BY67 442 aaKnown RBP9.77□□□□□ -0.85
NEDD8-204ENST00000526430 REG4Q9BYZ8 158 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 PRDM14Q9GZV8 571 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 ALG2Q9H553 416 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 CXorf56Q9H5V9 222 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 SDHAF3Q9NRP4 125 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-204ENST00000526430 C6orf203Q9P0P8 240 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-204ENST00000526430 PPP4R1LQ9P1A2 415 aa9.77□□□□□ -0.85
NEDD8-204ENST00000526430 BOKQ9UMX3 212 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-204ENST00000526430 SHISA8B8ZZ34 492 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 CXCR6O00574 342 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 GSC2O15499 205 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 FRS3O43559 492 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 GMFGO60234 142 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 LGI1O95970 557 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 CSTAP01040 98 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 UBTFL6P0CB48 400 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-204ENST00000526430 GKN3PP0CG01 181 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 IL7RP16871 459 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 GGT1P19440 569 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 IL11P20809 199 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 FUT4P22083 530 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 CRYGSP22914 178 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 DPP4P27487 766 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 SRD5A2P31213 254 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 PRKAR1BP31321 381 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 MNAT1P51948 309 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 ATP5J2P56134 94 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 CRYZQ08257 329 aaKnown RBP9.76□□□□□ -0.85
NEDD8-204ENST00000526430 NPTX1Q15818 432 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 CLEC12BQ2HXU8 276 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 PLPPR5Q32ZL2 321 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 IQCCQ4KMZ1 466 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 SLC25A53Q5H9E4 307 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 ZNF311Q5JNZ3 666 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 DCST1Q5T197 706 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 C16orf89Q6UX73 402 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 ASRGL1Q7L266 308 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 YRDCQ86U90 279 aaKnown RBP9.76□□□□□ -0.85
NEDD8-204ENST00000526430 RBM45Q8IUH3 476 aaKnown RBP9.76□□□□□ -0.85
NEDD8-204ENST00000526430 MISPQ8IVT2 679 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 CMIPQ8IY22 773 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 PEX5LQ8IYB4 626 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 ZNF614Q8N883 585 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 SMYD1Q8NB12 490 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 ZNF527Q8NB42 609 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 OR5M1Q8NGP8 315 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 OR5W2Q8NH69 310 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 WDR60Q8WVS4 1066 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 ZFP3Q96NJ6 502 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 PCDHAC1Q9H158 963 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 SLC6A15Q9H2J7 730 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 EXOSC3Q9NQT5 275 aaKnown RBP9.76□□□□□ -0.85
NEDD8-204ENST00000526430 MED17Q9NVC6 651 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 ZNF226Q9NYT6 803 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 EGFL7Q9UHF1 273 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 AP3M1Q9Y2T2 418 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 IFT52Q9Y366 437 aa9.76□□□□□ -0.85
NEDD8-204ENST00000526430 NOTCH1P46531 2555 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 C5orf58C9J3I9 102 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 ACOT8O14734 319 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 HCRTR2O43614 444 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 LYPD3O95274 346 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 THY1P04216 161 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 UBL4AP11441 157 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 HPGDP15428 266 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 TCN1P20061 433 aaPredicted RBP9.75□□□□□ -0.85
NEDD8-204ENST00000526430 GDF1P27539 372 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 MASP1P48740 699 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 STARP49675 285 aa9.75□□□□□ -0.85
NEDD8-204ENST00000526430 CLK3P49761 638 aaKnown RBP9.75□□□□□ -0.85
NEDD8-204ENST00000526430 AGFG1P52594 562 aaKnown RBP9.75□□□□□ -0.85
NEDD8-204ENST00000526430 NR1H2P55055 460 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms