RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 ADCY5O95622 1261 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 IGKV3-11P04433 115 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 ALOX5P09917 674 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 ATP6V1B2P21281 511 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 ANXA13P27216 316 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 RGS4P49798 205 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 LHX2P50458 406 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 RAP1BP61224 184 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 SELENOTP62341 195 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 RIPK1Q13546 671 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 SLC36A3Q495N2 470 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 C1orf100Q5SVJ3 147 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 TPGS2Q68CL5 300 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 GDPD3Q7L5L3 318 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 RDH10Q8IZV5 341 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 OR2T34Q8NGX1 318 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 OR1F12Q8NHA8 337 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 DTNBP1Q96EV8 351 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 KCNA7Q96RP8 456 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 RASL11BQ9BPW5 248 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 C20orf85Q9H1P6 137 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 SUDS3Q9H7L9 328 aaPredicted RBP2.7□□□□□ -1.98
CD44-215ENST00000525241 POPDC2Q9HBU9 364 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 PALMDQ9NP74 551 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 SMPD3Q9NY59 655 aaPredicted RBP2.7□□□□□ -1.98
CD44-215ENST00000525241 RAB26Q9ULW5 256 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 PRPF19Q9UMS4 504 aaKnown RBP2.7□□□□□ -1.98
CD44-215ENST00000525241 TP53TG5Q9Y2B4 290 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 WSB1Q9Y6I7 421 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 PLEKHH1Q9ULM0 1364 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 LRP5LA4QPB2 252 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 A6NDX4 124 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 E9PBE3 544 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 XPO1O14980 1071 aaKnown RBP2.69□□□□□ -1.98
CD44-215ENST00000525241 IDH1O75874 414 aaKnown RBP2.69□□□□□ -1.98
CD44-215ENST00000525241 STAMBPO95630 424 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 HEXBP07686 556 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 CHTF8P0CG12 524 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 NPR2P20594 1047 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 COX5AP20674 150 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 ATP6V1C1P21283 382 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 CCNCP24863 283 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 CXCR2P25025 360 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 HTR1FP30939 366 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 CHI3L1P36222 383 aaPredicted RBP2.69□□□□□ -1.98
CD44-215ENST00000525241 KIR2DS4P43632 304 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 TDO2P48775 406 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 KPNA2P52292 529 aaKnown RBP2.69□□□□□ -1.98
CD44-215ENST00000525241 SNTB2Q13425 540 aaKnown RBP2.69□□□□□ -1.98
CD44-215ENST00000525241 C1orf61Q13536 156 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 GRB7Q14451 532 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 NRF1Q16656 503 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 COX15Q7KZN9 410 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 ZNF429Q86V71 674 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 RALGPS2Q86X27 583 aaPredicted RBP2.69□□□□□ -1.98
CD44-215ENST00000525241 FTMTQ8N4E7 242 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 Q8N9W7 124 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 SYT14Q8NB59 555 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 MDS2Q8NDY4 140 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 OR10G3Q8NGC4 313 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 OR4D5Q8NGN0 318 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 HTR3CQ8WXA8 447 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 CTNNBL1Q8WYA6 563 aaPredicted RBP2.69□□□□□ -1.98
CD44-215ENST00000525241 TUBGCP2Q9BSJ2 902 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 ALG12Q9BV10 488 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 POLR1EQ9GZS1 481 aaKnown RBP2.69□□□□□ -1.98
CD44-215ENST00000525241 FOLH1BQ9HBA9 442 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.69□□□□□ -1.98
CD44-215ENST00000525241 C6orf203Q9P0P8 240 aaPredicted RBP2.69□□□□□ -1.98
CD44-215ENST00000525241 PCSK1NQ9UHG2 260 aa2.69□□□□□ -1.98
CD44-215ENST00000525241 BICDL2A1A5D9 508 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 RSPH10B2B2RC85 870 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 TBX19O60806 448 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 MMP1P03956 469 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 P04436 131 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 RSPH10BP0C881 870 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 HSPA5P11021 654 aaKnown RBP2.68□□□□□ -1.98
CD44-215ENST00000525241 CALCRP30988 508 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 SHMT2P34897 504 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 PPOXP50336 477 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 PPT1P50897 306 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 TAS2R19P59542 299 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 ELP6Q0PNE2 266 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 NADK2Q4G0N4 442 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 CES3Q6UWW8 571 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 TMIGD1Q6UXZ0 262 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 MFSD6LQ8IWD5 586 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 MARCH1Q8TCQ1 289 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 RAB7BQ96AH8 199 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 RNF185Q96GF1 192 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 PAGE5Q96GU1 130 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 OR2M2Q96R28 347 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 RIBC2Q9H4K1 309 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 PLGRKTQ9HBL7 147 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 TMOD2Q9NZR1 351 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 STAP1Q9ULZ2 295 aa2.68□□□□□ -1.98
CD44-215ENST00000525241 NACAE9PAV3 2078 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 IGLV3-16A0A075B6K0 115 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 A0A0G2JLM5 398 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 NKX2-6A6NCS4 301 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms