RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 HNRNPCL1O60812 293 aaKnown RBP14.37□□□□□ -0.11
CLN8-206ENST00000523237 THBS1P07996 1170 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 HNRNPCL4P0DMR1 293 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 SLC35A1P78382 337 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 FADDQ13158 208 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 RGNQ15493 299 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 TAB1Q15750 504 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 RNF220Q5VTB9 566 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 ZNF836Q6ZNA1 936 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 HDXQ7Z353 690 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 EBF4Q9BQW3 602 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 TMEM204Q9BSN7 226 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 ADAM19Q9H013 955 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 DLL4Q9NR61 685 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 ARGLU1Q9NWB6 273 aaPredicted RBP14.37□□□□□ -0.11
CLN8-206ENST00000523237 ZNF443Q9Y2A4 671 aaPredicted RBP14.37□□□□□ -0.11
CLN8-206ENST00000523237 IFT52Q9Y366 437 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 PRR14LQ5THK1 2151 aa14.37□□□□□ -0.11
CLN8-206ENST00000523237 FLNAP21333 2647 aaKnown RBP14.36□□□□□ -0.11
CLN8-206ENST00000523237 C2CD3Q4AC94 2353 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 A0A096LPI6 279 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 HS3ST1O14792 307 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 LYZL6O75951 148 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 PLAUP00749 431 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 GKN3PP0CG01 181 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 CXCR1P25024 350 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 EDNRAP25101 427 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 SLC16A1P53985 500 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 AQP5P55064 265 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 COPZ1P61923 177 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 IRX1P78414 480 aaPredicted RBP14.36□□□□□ -0.11
CLN8-206ENST00000523237 CAPRIN1Q14444 709 aaKnown RBP14.36□□□□□ -0.11
CLN8-206ENST00000523237 RPS26P11Q5JNZ5 115 aaPredicted RBP14.36□□□□□ -0.11
CLN8-206ENST00000523237 BLOC1S3Q6QNY0 202 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.36□□□□□ -0.11
CLN8-206ENST00000523237 KRTAP1-3Q8IUG1 177 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 CCDC103Q8IW40 242 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 UBE2J2Q8N2K1 259 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 APH1AQ96BI3 265 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 NAA11Q9BSU3 229 aaPredicted RBP14.36□□□□□ -0.11
CLN8-206ENST00000523237 SPATA9Q9BWV2 254 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 ESRP2Q9H6T0 727 aaKnown RBP14.36□□□□□ -0.11
CLN8-206ENST00000523237 A4GALTQ9NPC4 353 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 INTS9Q9NV88 658 aaKnown RBP14.36□□□□□ -0.11
CLN8-206ENST00000523237 CCDC167Q9P0B6 97 aa14.36□□□□□ -0.11
CLN8-206ENST00000523237 NR5A2O00482 541 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 MRPL33O75394 65 aaKnown RBP14.35□□□□□ -0.11
CLN8-206ENST00000523237 IMPDH2P12268 514 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 BMP2P12643 396 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 HOXB9P17482 250 aaPredicted RBP14.35□□□□□ -0.11
CLN8-206ENST00000523237 COX5AP20674 150 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 IGHV1-2P23083 117 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 ACAA2P42765 397 aaKnown RBP14.35□□□□□ -0.11
CLN8-206ENST00000523237 H3F3AP84243 136 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 STK11Q15831 433 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 Q5PR19 223 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 NCMAPQ5T1S8 102 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 LRIF1Q5T3J3 769 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 PRAMEF8Q5VWM4 474 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 PRAMEF7Q5VXH5 474 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 FBXW9Q5XUX1 488 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 WBP2NLQ6ICG8 309 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 SSX8Q7RTT4 187 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 FUNDC1Q8IVP5 155 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 CLIP4Q8N3C7 705 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 CADM2Q8N3J6 435 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 ZNF611Q8N823 705 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 MUCL1Q96DR8 90 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 SPDL1Q96EA4 605 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 VIPAS39Q9H9C1 493 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 TMEM45AQ9NWC5 275 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 RNF115Q9Y4L5 304 aa14.35□□□□□ -0.11
CLN8-206ENST00000523237 ARID1AO14497 2285 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 ZC3H12DA2A288 527 aaKnown RBP14.34□□□□□ -0.11
CLN8-206ENST00000523237 C5orf58C9J3I9 102 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 RAMP1O60894 148 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 GPIP06744 558 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 CD3EP07766 207 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 NUDT7P0C024 238 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 GGT1P19440 569 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 NCF2P19878 526 aaPredicted RBP14.34□□□□□ -0.11
CLN8-206ENST00000523237 PPIBP23284 216 aaKnown RBP14.34□□□□□ -0.11
CLN8-206ENST00000523237 IDUAP35475 653 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 ATP4BP51164 291 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 ZNF311Q5JNZ3 666 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 TIMM23BQ5SRD1 257 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 PAQR6Q6TCH4 344 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 P2RY8Q86VZ1 359 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 BBS10Q8TAM1 723 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 TMEM171Q8WVE6 324 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 AKAP1Q92667 903 aaKnown RBP eCLIP14.34□□□□□ -0.11
CLN8-206ENST00000523237 MAL2Q969L2 176 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 PERPQ96FX8 193 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 C18orf12Q96KH6 178 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 BCL2L10Q9HD36 194 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 SLC25A37Q9NYZ2 338 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 MTORP42345 2549 aa14.34□□□□□ -0.11
CLN8-206ENST00000523237 SETD2Q9BYW2 2564 aaPredicted RBP14.33□□□□□ -0.11
CLN8-206ENST00000523237 ACANP16112 2415 aa14.33□□□□□ -0.12
CLN8-206ENST00000523237 CLOCKO15516 846 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms