RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ARMC12Q5T9G4 340 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 WDR74Q6RFH5 385 aaPredicted RBP4□□□□□ -1.77
HMGB1P46-201ENST00000520062 ENPP6Q6UWR7 440 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 FRA10AC1Q70Z53 315 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 APOBEC3FQ8IUX4 373 aaKnown RBP4□□□□□ -1.77
HMGB1P46-201ENST00000520062 CCDC65Q8IXS2 484 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 BBS5Q8N3I7 341 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 OR56B4Q8NH76 319 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 RHOXF1Q8NHV9 184 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 RAB3IL1Q8TBN0 382 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 ST8SIA1Q92185 356 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 ANKRD19PQ9H560 264 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 REEP4Q9H6H4 257 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 SLC2A8Q9NY64 477 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 TMCO1Q9UM00 188 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 PEX16Q9Y5Y5 336 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 IQANK1A0A1B0GTG1 560 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 A8MXQ7 604 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 LYPLA1O75608 230 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 UPK3AO75631 287 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 GATA2P23769 480 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 CALCRP30988 508 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 NTSP30990 170 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 MEOX2P50222 304 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 HLCSP50747 726 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 PKNOX1P55347 436 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 CCDC173Q0VFZ6 552 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 GSG1Q2KHT4 349 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 DMRTC1Q5HYR2 192 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 PPP1R27Q86WC6 154 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 SLC39A11Q8N1S5 342 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 RAPGEF5Q92565 580 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 NUS1Q96E22 293 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 VSIG2Q96IQ7 327 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 SERAC1Q96JX3 654 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 IFT74Q96LB3 600 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 TBX15Q96SF7 602 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 RNF2Q99496 336 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 RNF126Q9BV68 326 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 NMUR2Q9GZQ4 415 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 NT5MQ9NPB1 228 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 IKZF2Q9UKS7 526 aa3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 RPL36Q9Y3U8 105 aaKnown RBP3.99□□□□□ -1.77
HMGB1P46-201ENST00000520062 SH3TC1Q8TE82 1336 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 A0A1W2PQ72 361 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 HEATR9A2RTY3 570 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 TMEM110-MUSTN1A8MSY1 372 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 HCRTR1O43613 425 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 SERF1AO75920 110 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 AGTP01019 485 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 SEMG1P04279 462 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 CRYGBP07316 175 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 MCF2P10911 925 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 ATP1B2P14415 290 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 CCNCP24863 283 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 CD1CP29017 333 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 IL12AP29459 219 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 RFC4P35249 363 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 DDOSTP39656 456 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 TPMTP51580 245 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 DUSP7Q16829 419 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 ZNF658Q5TYW1 1059 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 MARC1Q5VT66 337 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 MOB1BQ7L9L4 216 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 ARCQ7LC44 396 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 ZNF525Q8N782 197 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 CEP112Q8N8E3 955 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 KCNG3Q8TAE7 436 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 KLHDC3Q9BQ90 382 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 Q9H3A6 140 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 NMRAL1Q9HBL8 299 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 ABCG2Q9UNQ0 655 aa3.98□□□□□ -1.77
HMGB1P46-201ENST00000520062 TCRBV9S1A1TA0A576 114 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 UGT1A9O60656 530 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 TBL1XO60907 577 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 CRLF1O75462 422 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 THY1P04216 161 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 TROVE2P10155 538 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 HTR1FP30939 366 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 PRKAR2BP31323 418 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 SRSF5Q13243 272 aaKnown RBP3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 GK3PQ14409 553 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 ZNF77Q15935 545 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 PRR30Q53SZ7 412 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 CARD16Q5EG05 197 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 KLF17Q5JT82 389 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 TFAP2EQ6VUC0 442 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 KDM7AQ6ZMT4 941 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 ACOT7LQ6ZUV0 252 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 PGAP1Q75T13 922 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 CDC20BQ86Y33 519 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 NUDCD3Q8IVD9 361 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 TTC5Q8N0Z6 440 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 OR52H1Q8NGJ2 320 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 OR9A1PQ8NGU1 263 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 TYMSOSQ8TAI1 123 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 ZPLD1Q8TCW7 415 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 UFD1Q92890 307 aa3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 ZNF641Q96N77 438 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P46-201ENST00000520062 NUP58Q9BVL2 599 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms