RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 MBD6Q96DN6 1003 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 ZC3HAV1LQ96H79 300 aaKnown RBP8.31□□□□□ -1.08
HDAC3-215ENST00000519474 REXO5Q96IC2 774 aaKnown RBP8.31□□□□□ -1.08
HDAC3-215ENST00000519474 OR5B2Q96R09 309 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 PSD2Q9BQI7 771 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 UQCC2Q9BRT2 126 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 MED18Q9BUE0 208 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 RMND5AQ9H871 391 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 VIPAS39Q9H9C1 493 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 BCO1Q9HAY6 547 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 GP6Q9HCN6 339 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 INTS9Q9NV88 658 aaKnown RBP8.31□□□□□ -1.08
HDAC3-215ENST00000519474 RLIMQ9NVW2 624 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 ZNF226Q9NYT6 803 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 PAIP2BQ9ULR5 123 aaKnown RBP8.31□□□□□ -1.08
HDAC3-215ENST00000519474 GPR52Q9Y2T5 361 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 SNX5Q9Y5X3 404 aa8.31□□□□□ -1.08
HDAC3-215ENST00000519474 DCHS2Q6V1P9 2916 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 CSMD2Q7Z408 3487 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 FREM1Q5H8C1 2179 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 SULT2B1O00204 365 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 FAAHO00519 579 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 SMAD9O15198 467 aaKnown RBP8.3□□□□□ -1.08
HDAC3-215ENST00000519474 SASH3O75995 380 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 ATE1O95260 518 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 DBIP07108 87 aaKnown RBP8.3□□□□□ -1.08
HDAC3-215ENST00000519474 NUDT7P0C024 238 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 GKN3PP0CG01 181 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 TFPIP10646 304 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 CCNA2P20248 432 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 PSMB1P20618 241 aaKnown RBP8.3□□□□□ -1.08
HDAC3-215ENST00000519474 EDNRAP25101 427 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 FKBP2P26885 142 aaKnown RBP8.3□□□□□ -1.08
HDAC3-215ENST00000519474 SLC7A1P30825 629 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 DIO1P49895 249 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 ANXA11P50995 505 aaKnown RBP8.3□□□□□ -1.08
HDAC3-215ENST00000519474 AQP5P55064 265 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 DSTNP60981 165 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 RASGEF1BQ0VAM2 473 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 TSC22D1Q15714 1073 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 SYT14P1Q58G82 188 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 MRPL2Q5T653 305 aaKnown RBP8.3□□□□□ -1.08
HDAC3-215ENST00000519474 C3orf33Q6P1S2 294 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 USP51Q70EK9 711 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 GRINAQ7Z429 371 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 MSRB3Q8IXL7 192 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 GABRG1Q8N1C3 465 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 SPERTQ8NA61 448 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 OR52P1PQ8NH57 321 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 DNAJA3Q96EY1 480 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 NRBF2Q96F24 287 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 PIK3IP1Q96FE7 263 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 HS3ST6Q96QI5 342 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 HDHD5Q9BXW7 423 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 OR11A1Q9GZK7 315 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 SLC25A37Q9NYZ2 338 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 KLHL13Q9P2N7 655 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 CHRNA9Q9UGM1 479 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 OSGIN1Q9UJX0 560 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 EDARQ9UNE0 448 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 TRAPPC4Q9Y296 219 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 CSMD1Q96PZ7 3565 aa8.3□□□□□ -1.08
HDAC3-215ENST00000519474 PRR14LQ5THK1 2151 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 MED13LQ71F56 2210 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 AKAP6Q13023 2319 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 A0A096LPI6 279 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 TMED7-TICAM2A0A0A6YYA0 188 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 A0A0G2JPF8 293 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 TMEM72A0PK05 275 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 CFAP73A6NFT4 308 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 ZNF724A8MTY0 619 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 HNRNPCL3B7ZW38 293 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 RAMP1O60894 148 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 PMS2P2O95744 297 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 BPNT1O95861 308 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 ADAP00813 363 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 RAF1P04049 648 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 BCHEP06276 602 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 HNRNPCL4P0DMR1 293 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 BMP2P12643 396 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 PRG2P13727 222 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 PPP3CBP16298 524 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 TACR3P29371 465 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 SLC1A3P43003 542 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 OR3A2P47893 321 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 H3F3AP84243 136 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 EPS8Q12929 822 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 DYNC1I2Q13409 638 aaKnown RBP8.29□□□□□ -1.08
HDAC3-215ENST00000519474 KEAP1Q14145 624 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 PDK3Q15120 406 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 DEFB113Q30KQ7 82 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 AGKQ53H12 422 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 C6orf10Q5SRN2 563 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 LRIF1Q5T3J3 769 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 SFRP5Q5T4F7 317 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 PAMR1Q6UXH9 720 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 TFAP2EQ6VUC0 442 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 STK32CQ86UX6 486 aa8.29□□□□□ -1.08
HDAC3-215ENST00000519474 CXorf67Q86X51 503 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-215ENST00000519474 CCDC103Q8IW40 242 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms