RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 GORASP2Q9H8Y8 452 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 SMPD3Q9NY59 655 aaPredicted RBP3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 PTBP2Q9UKA9 531 aaKnown RBP3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 CDH10Q9Y6N8 788 aa3.44□□□□□ -1.86
HMGCS1-207ENST00000514610 F5H6K3 240 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 ABCD4O14678 606 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 TRAF3IP2O43734 574 aaPredicted RBP3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 PFKFB2O60825 505 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 SNNO75324 88 aaPredicted RBP3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 SNAPINO95295 136 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 STAMBPO95630 424 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 COX5AP20674 150 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 ATP6V1B2P21281 511 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 KLK7P49862 253 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 HNMTP50135 292 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 UBE2HP62256 183 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 SPIBQ01892 262 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 KLRC3Q07444 240 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 ZNF763Q0D2J5 394 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 ANKDD1AQ495B1 522 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 BCL7AQ4VC05 210 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 C1orf146Q5VVC0 180 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 PRSS41Q7RTY9 318 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 NEIL3Q8TAT5 605 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 FGF11Q92914 225 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 HES7Q9BYE0 225 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 TREM2Q9NZC2 230 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 BTNL2Q9UIR0 455 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 STAP1Q9ULZ2 295 aa3.43□□□□□ -1.86
HMGCS1-207ENST00000514610 PLEKHG1Q9ULL1 1385 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 COL16A1Q07092 1604 aaPredicted RBP3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 IGHV3OR16-13A0A075B7E8 117 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 IGHV1OR21-1A0A087WYE8 117 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 IDSB3KWA1 339 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 GFYI3L273 518 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 RGS16O15492 202 aaPredicted RBP3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 NPIPB7O75200 414 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 BBOX1O75936 387 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 OPN1MWP04001 364 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 OPN1MW2P0DN77 364 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 OPN1MW3P0DN78 364 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 ZNF44P15621 663 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 CCNE1P24864 410 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 EFNB2P52799 333 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 NUP107P57740 925 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 SLC15A2Q16348 729 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 CARD16Q5EG05 197 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 C1orf220Q5T0J3 134 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 RFLNAQ6ZTI6 216 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 RDH10Q8IZV5 341 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 NKAPP1Q8N9T2 125 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 DCAF4L2Q8NA75 395 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 HTR3CQ8WXA8 447 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 ELSPBP1Q96BH3 223 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 CYYR1Q96J86 154 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 POLR2J2Q9GZM3 115 aaKnown RBP3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 POLR2J3Q9H1A7 115 aaKnown RBP3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 ASB8Q9H765 288 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 SUDS3Q9H7L9 328 aaPredicted RBP3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 APMAPQ9HDC9 416 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 AIG1Q9NVV5 245 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 PRPF19Q9UMS4 504 aaKnown RBP3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 SLCO1B1Q9Y6L6 691 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 PTCH1Q13635 1447 aa3.42□□□□□ -1.86
HMGCS1-207ENST00000514610 HELTA6NFD8 242 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 A6NIZ1 184 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 MBTPS2O43462 519 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 MTX2O75431 263 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 NCK1P16333 377 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 ZNF17P17021 662 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 GLRA2P23416 452 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 HMGB2P26583 209 aaKnown RBP3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 ANXA13P27216 316 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 HTR1EP28566 365 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 CALCRP30988 508 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 SHMT2P34897 504 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 CTRLP40313 264 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 QARSP47897 775 aaKnown RBP3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 RAP1BP61224 184 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 TGFBR3Q03167 851 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 KLRB1Q12918 225 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 RIPK1Q13546 671 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 C11orf71Q6IPW1 123 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 ZNF530Q6P9A1 599 aaPredicted RBP3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 NLRP9Q7RTR0 991 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 PPP1R42Q7Z4L9 355 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 FTMTQ8N4E7 242 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 OR4K14Q8NGD5 310 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 FBXO30Q8TB52 745 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 BRSK1Q8TDC3 778 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 RNF138Q8WVD3 245 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 DNAJA4Q8WW22 397 aaPredicted RBP3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 EFHD2Q96C19 240 aaPredicted RBP3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 COQ2Q96H96 371 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 ZNF414Q96IQ9 312 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 TSG101Q99816 390 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 CRACR2AQ9BSW2 395 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 NXF3Q9H4D5 531 aaKnown RBP3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 FOLH1BQ9HBA9 442 aa3.41□□□□□ -1.86
HMGCS1-207ENST00000514610 HOXC10Q9NYD6 342 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms