RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 CIDECQ96AQ7 238 aaPredicted RBP9.68□□□□□ -0.86
RNF4-218ENST00000513284 TRIM44Q96DX7 344 aaPredicted RBP9.68□□□□□ -0.86
RNF4-218ENST00000513284 EGLN2Q96KS0 407 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 FCRL1Q96LA6 429 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 PPP3R2Q96LZ3 170 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 TSSK3Q96PN8 268 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 LRRC37BQ96QE4 947 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 PRPF18Q99633 342 aaKnown RBP9.68□□□□□ -0.86
RNF4-218ENST00000513284 SLC6A7Q99884 636 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 BTBD2Q9BX70 525 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 SEC61A2Q9H9S3 476 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 DUSP22Q9NRW4 184 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 ZCCHC3Q9NUD5 404 aaKnown RBP9.68□□□□□ -0.86
RNF4-218ENST00000513284 ATAD3AQ9NVI7 634 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 GIN1Q9NXP7 522 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 EMCNQ9ULC0 261 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 FAF1Q9UNN5 650 aaPredicted RBP9.68□□□□□ -0.86
RNF4-218ENST00000513284 AMDHD2Q9Y303 409 aa9.68□□□□□ -0.86
RNF4-218ENST00000513284 A0A1W2PPM1 405 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 NPIPB9F8W1W9 429 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 TRIM13O60858 407 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 DNAJA2O60884 412 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 MRPL33O75394 65 aaKnown RBP9.67□□□□□ -0.86
RNF4-218ENST00000513284 LYPLA1O75608 230 aaPredicted RBP9.67□□□□□ -0.86
RNF4-218ENST00000513284 PDE5AO76074 875 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 MSMBP08118 114 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 SDC1P18827 310 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 COL8A2P25067 703 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 CALCRP30988 508 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 SLC16A1P53985 500 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 PRPS1P60891 318 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 LMO4P61968 165 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 TP53BP2Q13625 1128 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 PDE7AQ13946 482 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 LASP1Q14847 261 aaKnown RBP9.67□□□□□ -0.86
RNF4-218ENST00000513284 QPRTQ15274 297 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 TUSC1Q2TAM9 212 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 LSM12Q3MHD2 195 aaKnown RBP9.67□□□□□ -0.86
RNF4-218ENST00000513284 GALNTL6Q49A17 601 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 TIGD2Q4W5G0 525 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 ZNF385BQ569K4 471 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 CLEC6AQ6EIG7 209 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 ANKRD26P1Q6NSI1 321 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 FAHD2BQ6P2I3 314 aaPredicted RBP9.67□□□□□ -0.86
RNF4-218ENST00000513284 ANKRD16Q6P6B7 361 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 DDIASQ8IXT1 998 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 GSPT2Q8IYD1 628 aaKnown RBP9.67□□□□□ -0.86
RNF4-218ENST00000513284 C17orf78Q8N4C9 275 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 C1orf162Q8NEQ5 155 aaPredicted RBP9.67□□□□□ -0.86
RNF4-218ENST00000513284 TOR1AIP2Q8NFQ8 470 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 OR56A1Q8NGH5 318 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 WDR60Q8WVS4 1066 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 MOAP1Q96BY2 351 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 DNAJA3Q96EY1 480 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 FAHD2AQ96GK7 314 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 BOD1Q96IK1 185 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 JMJD8Q96S16 334 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 PIGUQ9H490 435 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 G6PC2Q9NQR9 355 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 TREM2Q9NZC2 230 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 EMC3Q9P0I2 261 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 DCTN4Q9UJW0 460 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 CCL27Q9Y4X3 112 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 KCNE3Q9Y6H6 103 aa9.67□□□□□ -0.86
RNF4-218ENST00000513284 SH3PXD2BA1X283 911 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 GTPBP1O00178 669 aaKnown RBP9.66□□□□□ -0.86
RNF4-218ENST00000513284 SULT2B1O00204 365 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 LSM1O15116 133 aaKnown RBP9.66□□□□□ -0.86
RNF4-218ENST00000513284 KRT4P19013 534 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 THBS4P35443 961 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 H3F3AP84243 136 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 NAAAQ02083 359 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 OCLNQ16625 522 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 SPDYE7PQ495Y7 208 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 ATP6AP1LQ52LC2 224 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 ELFN2Q5R3F8 820 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 CDC73Q6P1J9 531 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 OR5W2Q8NH69 310 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 CLHC1Q8NHS4 586 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 RFWD2Q8NHY2 731 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 TWIST2Q8WVJ9 160 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 OR5P2Q8WZ92 322 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 TAF15Q92804 592 aaKnown RBP eCLIP9.66□□□□□ -0.866e-6■■■■□ 22
RNF4-218ENST00000513284 FAM120BQ96EK7 910 aaKnown RBP9.66□□□□□ -0.86
RNF4-218ENST00000513284 ARL5BQ96KC2 179 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 SLC38A2Q96QD8 506 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 ACTRT3Q9BYD9 372 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 TMPRSS13Q9BYE2 586 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 NARFLQ9H6Q4 476 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 UNKLQ9H9P5 680 aaKnown RBP9.66□□□□□ -0.86
RNF4-218ENST00000513284 GRIP1Q9Y3R0 1128 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 PCDHB14Q9Y5E9 798 aa9.66□□□□□ -0.86
RNF4-218ENST00000513284 SMIM23A6NLE4 172 aa9.65□□□□□ -0.86
RNF4-218ENST00000513284 DUXAA6NLW8 204 aa9.65□□□□□ -0.86
RNF4-218ENST00000513284 hCG_2039718K7EN88 272 aa9.65□□□□□ -0.86
RNF4-218ENST00000513284 GPR171O14626 319 aa9.65□□□□□ -0.86
RNF4-218ENST00000513284 SCAMP2O15127 329 aaKnown RBP9.65□□□□□ -0.86
RNF4-218ENST00000513284 NPHS1O60500 1241 aa9.65□□□□□ -0.86
RNF4-218ENST00000513284 AK1P00568 194 aa9.65□□□□□ -0.86
RNF4-218ENST00000513284 SHBGP04278 402 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms