RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 HSD17B8Q92506 261 aa20.33■□□□□ 0.85
SNF8-209ENST00000510558 CCDC28BQ9BUN5 200 aa20.33■□□□□ 0.85
SNF8-209ENST00000510558 NOSIPQ9Y314 301 aaKnown RBP20.33■□□□□ 0.85
SNF8-209ENST00000510558 CLIC1O00299 241 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 RAMP1O60894 148 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 CNOT4O95628 575 aaKnown RBP20.32■□□□□ 0.84
SNF8-209ENST00000510558 GKN3PP0CG01 181 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 HOXB9P17482 250 aaPredicted RBP20.32■□□□□ 0.84
SNF8-209ENST00000510558 COX5AP20674 150 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 ACAA2P42765 397 aaKnown RBP20.32■□□□□ 0.84
SNF8-209ENST00000510558 MAP2K6P52564 334 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 SLC16A1P53985 500 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 CAPRIN1Q14444 709 aaKnown RBP20.32■□□□□ 0.84
SNF8-209ENST00000510558 LARS2Q15031 903 aaKnown RBP20.32■□□□□ 0.84
SNF8-209ENST00000510558 RGNQ15493 299 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 Q5PR19 223 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 RNF220Q5VTB9 566 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 FUNDC1Q8IVP5 155 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 CCDC103Q8IW40 242 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 ADAM19Q9H013 955 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 RAD21L1Q9H4I0 556 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 NGBQ9NPG2 151 aa20.32■□□□□ 0.84
SNF8-209ENST00000510558 A0A096LPI6 279 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 A0A0G2JPF8 293 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 ZC3H12DA2A288 527 aaKnown RBP20.31■□□□□ 0.84
SNF8-209ENST00000510558 HNRNPCL2B2RXH8 293 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 HNRNPCL3B7ZW38 293 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 GPR171O14626 319 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 HS3ST1O14792 307 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 HNRNPCL1O60812 293 aaKnown RBP20.31■□□□□ 0.84
SNF8-209ENST00000510558 THBS1P07996 1170 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 NUDT7P0C024 238 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 HNRNPCL4P0DMR1 293 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 IMPDH2P12268 514 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 IGHV1-2P23083 117 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 AQP5P55064 265 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 SLC35A1P78382 337 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 H3F3AP84243 136 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 FADDQ13158 208 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 BLOC1S3Q6QNY0 202 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 CLIP4Q8N3C7 705 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 GOLGA6L1Q8N7Z2 621 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 CACYBPQ9HB71 228 aaKnown RBP20.31■□□□□ 0.84
SNF8-209ENST00000510558 ZNF232Q9UNY5 417 aa20.31■□□□□ 0.84
SNF8-209ENST00000510558 NR5A2O00482 541 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 EIF1BO60739 113 aaKnown RBP20.3■□□□□ 0.84
SNF8-209ENST00000510558 IGHV3-9P01782 118 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 BMP2P12643 396 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 STK11Q15831 433 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 ZSWIM7Q19AV6 140 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 NCMAPQ5T1S8 102 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 FBXW9Q5XUX1 488 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 SEZ6L2Q6UXD5 910 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 HDXQ7Z353 690 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 CADM2Q8N3J6 435 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 ZNF611Q8N823 705 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 IGFBPL1Q8WX77 278 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 AKAP1Q92667 903 aaKnown RBP eCLIP20.3■□□□□ 0.84
SNF8-209ENST00000510558 APH1AQ96BI3 265 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 SPDL1Q96EA4 605 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 PERPQ96FX8 193 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 NAA11Q9BSU3 229 aaPredicted RBP20.3■□□□□ 0.84
SNF8-209ENST00000510558 SPATA9Q9BWV2 254 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 ESRP2Q9H6T0 727 aaKnown RBP20.3■□□□□ 0.84
SNF8-209ENST00000510558 A4GALTQ9NPC4 353 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 INTS9Q9NV88 658 aaKnown RBP20.3■□□□□ 0.84
SNF8-209ENST00000510558 SLC25A37Q9NYZ2 338 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 CCDC167Q9P0B6 97 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 PRDM4Q9UKN5 801 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 CHST2Q9Y4C5 530 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 RNF115Q9Y4L5 304 aa20.3■□□□□ 0.84
SNF8-209ENST00000510558 VPS13CQ709C8 3753 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 CADP27708 2225 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 HMGB1P1B2RPK0 211 aaPredicted RBP20.29■□□□□ 0.84
SNF8-209ENST00000510558 CXCR1P25024 350 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 NTF4P34130 210 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 COPZ1P61923 177 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 LRIF1Q5T3J3 769 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 PRAMEF8Q5VWM4 474 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 PRAMEF7Q5VXH5 474 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 WBP2NLQ6ICG8 309 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 ATG4DQ86TL0 474 aaPredicted RBP20.29■□□□□ 0.84
SNF8-209ENST00000510558 UBE2J2Q8N2K1 259 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 MAL2Q969L2 176 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 GSX1Q9H4S2 264 aaPredicted RBP20.29■□□□□ 0.84
SNF8-209ENST00000510558 ARMC7Q9H6L4 198 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 BCL2L10Q9HD36 194 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 IFT52Q9Y366 437 aa20.29■□□□□ 0.84
SNF8-209ENST00000510558 CLOCKO15516 846 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 MRPL33O75394 65 aaKnown RBP20.28■□□□□ 0.84
SNF8-209ENST00000510558 CD3EP07766 207 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 PRG2P13727 222 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 GGT1P19440 569 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 IDUAP35475 653 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 PPA1Q15181 289 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 PAQR6Q6TCH4 344 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 MSRB3Q8IXL7 192 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 ZNF433Q8N7K0 673 aaPredicted RBP20.28■□□□□ 0.84
SNF8-209ENST00000510558 BBS10Q8TAM1 723 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 TMEM171Q8WVE6 324 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms