RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ERICH4A6NGS2 130 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 GNGT2O14610 69 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 TNFSF11O14788 317 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 PMS2P2O95744 297 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 STSP08842 583 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 FCGR2AP12318 317 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 ACVR2AP27037 513 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 MAGEA2P43356 314 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 YAP1P46937 504 aaKnown RBP18.06■□□□□ 0.48
USP53-203ENST00000507597 CLDN15P56746 228 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 CLDN20P56880 219 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 SLC35A1P78382 337 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 C1orf140Q5VVS0 124 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 P4HA3Q7Z4N8 544 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 ADGRG5Q8IZF4 528 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 UTP4Q969X6 686 aaKnown RBP18.06■□□□□ 0.48
USP53-203ENST00000507597 NAA11Q9BSU3 229 aaPredicted RBP18.06■□□□□ 0.48
USP53-203ENST00000507597 CHID1Q9BWS9 393 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 NMNAT1Q9HAN9 279 aaPredicted RBP18.06■□□□□ 0.48
USP53-203ENST00000507597 PNPLA3Q9NST1 481 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 CCM2LQ9NUG4 571 aaPredicted RBP18.06■□□□□ 0.48
USP53-203ENST00000507597 TMCC3Q9ULS5 477 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 OSGIN2Q9Y236 505 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 MED31Q9Y3C7 131 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 ZNF175Q9Y473 711 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 TRAV36DV7A0A075B6V5 113 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 A0A0J9YW62 118 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 A0A1W2PRQ8 180 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 EFNA2O43921 213 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 WISP2O76076 250 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 GADD45GO95257 159 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 IGF2P01344 180 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 FCGR1AP12314 374 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 IL11P20809 199 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 IFNGR2P38484 337 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 NUP107P57740 925 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 ACTR3P61158 418 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 SPIBQ01892 262 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 DGCR6Q14129 220 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 C1orf185Q5T7R7 199 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 ZFP1Q6P2D0 407 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 LINC00114Q6XXX2 140 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 B3GNT6Q6ZMB0 384 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 FGD2Q7Z6J4 655 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 GGNQ86UU5 652 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 CHERPQ8IWX8 916 aaKnown RBP18.05■□□□□ 0.48
USP53-203ENST00000507597 LINC00471Q8N535 108 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 OR10D3Q8NH80 312 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 TMEM239Q8WW34 195 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 ZNF524Q96C55 264 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 UCN2Q96RP3 112 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 TNFRSF10DQ9UBN6 386 aa18.05■□□□□ 0.48
USP53-203ENST00000507597 CD8B2A6NJW9 211 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 E9PLN8 166 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 J3KTA2 159 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 HNRNPRO43390 633 aaKnown RBP18.04■□□□□ 0.48
USP53-203ENST00000507597 RRP9O43818 475 aaKnown RBP18.04■□□□□ 0.48
USP53-203ENST00000507597 CST1P01037 141 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 OPN1LWP04000 364 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 CA7P43166 264 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 DIO1P49895 249 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 ARHGDIAP52565 204 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 OR2B6P58173 313 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 IGFBP7Q16270 282 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 EIF2S3LQ2VIR3 472 aaKnown RBP18.04■□□□□ 0.48
USP53-203ENST00000507597 DCST1Q5T197 706 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 FAM69AQ5T7M9 428 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 EEF1A1P5Q5VTE0 462 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 ZNF730Q6ZMV8 503 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 DOLPP1Q86YN1 238 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 SLC43A2Q8N370 569 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 PAPD5Q8NDF8 572 aaKnown RBP18.04■□□□□ 0.48
USP53-203ENST00000507597 MFSD8Q8NHS3 518 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 ACOT11Q8WXI4 607 aaPredicted RBP18.04■□□□□ 0.48
USP53-203ENST00000507597 DUS3LQ96G46 650 aaKnown RBP18.04■□□□□ 0.48
USP53-203ENST00000507597 ADGRG7Q96K78 797 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 TRIB1Q96RU8 372 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 TM9SF2Q99805 663 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 VKORC1Q9BQB6 163 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 REEP1Q9H902 201 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 AP4S1Q9Y587 144 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 NCKAP5O14513 1909 aa18.04■□□□□ 0.48
USP53-203ENST00000507597 MT-ATP6P00846 226 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 HIST1H2ABP04908 130 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 ENPP1P22413 925 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 SUCLG1P53597 346 aaKnown RBP18.03■□□□□ 0.48
USP53-203ENST00000507597 PER3P56645 1201 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 MYBPHQ13203 477 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 MRPL49Q13405 166 aaKnown RBP18.03■□□□□ 0.48
USP53-203ENST00000507597 TAF11Q15544 211 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 C3AR1Q16581 482 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 FGD3Q5JSP0 725 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 NSUN5P2Q63ZY6 315 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 OR2T5Q6IEZ7 315 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 OR2A2Q6IF42 318 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 PPP4R4Q6NUP7 873 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 ZNF771Q7L3S4 317 aaPredicted RBP18.03■□□□□ 0.48
USP53-203ENST00000507597 HIST3H2AQ7L7L0 130 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 MCEMP1Q8IX19 187 aa18.03■□□□□ 0.48
USP53-203ENST00000507597 C10orf53Q8N6V4 93 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms