RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 MRPL2Q5T653 305 aaKnown RBP11.58□□□□□ -0.56
DDX41-204ENST00000504807 ATAD3BQ5T9A4 648 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 ADAM5Q6NVV9 412 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 ZNF836Q6ZNA1 936 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 GRINAQ7Z429 371 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 MTDHQ86UE4 582 aaKnown RBP11.58□□□□□ -0.56
DDX41-204ENST00000504807 COMTD1Q86VU5 262 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 SLC43A2Q8N370 569 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 ARFGAP2Q8N6H7 521 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 STEAP2Q8NFT2 490 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 ZNF563Q8TA94 476 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 PIWIL2Q8TC59 973 aaKnown RBP11.58□□□□□ -0.56
DDX41-204ENST00000504807 TRNT1Q96Q11 434 aaKnown RBP11.58□□□□□ -0.56
DDX41-204ENST00000504807 AMBRA1Q9C0C7 1298 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 KLHL9Q9P2J3 617 aa11.58□□□□□ -0.56
DDX41-204ENST00000504807 MAGED1Q9Y5V3 778 aaPredicted RBP11.58□□□□□ -0.56
DDX41-204ENST00000504807 MGAM2Q2M2H8 2515 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 TMED7-TICAM2A0A0A6YYA0 188 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 SHISA9B4DS77 424 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 OVOL3O00110 214 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 PMS2P2O95744 297 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 AGR2O95994 175 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 CD8AP01732 235 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 THBS1P07996 1170 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 TFPTP0C1Z6 253 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 FAM157CP0CG43 387 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 TFPIP10646 304 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 IL32P24001 234 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 TACR3P29371 465 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 CDKN1AP38936 164 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 APOBEC1P41238 236 aaKnown RBP11.57□□□□□ -0.56
DDX41-204ENST00000504807 ACAA2P42765 397 aaKnown RBP11.57□□□□□ -0.56
DDX41-204ENST00000504807 SLC25A3Q00325 362 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 EPS8Q12929 822 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 P2RY6Q15077 328 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 STK11Q15831 433 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 PDCD4Q53EL6 469 aaKnown RBP11.57□□□□□ -0.56
DDX41-204ENST00000504807 LRRC74BQ6ZQY2 392 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 MSRB3Q8IXL7 192 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 CLIP4Q8N3C7 705 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 ZNF433Q8N7K0 673 aaPredicted RBP11.57□□□□□ -0.56
DDX41-204ENST00000504807 VPS37AQ8NEZ2 397 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 OR52E4Q8NGH9 312 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 TMEM234Q8WY98 164 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 POTEKPQ9BYX7 375 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 TRIM2Q9C040 744 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 MANSC1Q9H8J5 431 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 SDR39U1Q9NRG7 319 aaPredicted RBP11.57□□□□□ -0.56
DDX41-204ENST00000504807 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.57□□□□□ -0.56
DDX41-204ENST00000504807 LAMP3Q9UQV4 416 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 TMED7Q9Y3B3 224 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 RNF115Q9Y4L5 304 aa11.57□□□□□ -0.56
DDX41-204ENST00000504807 ABCA1O95477 2261 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 CDHR4A6H8M9 788 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 PDLIM1O00151 329 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 TLX2O43763 284 aaPredicted RBP11.56□□□□□ -0.56
DDX41-204ENST00000504807 RAD51DO75771 328 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 PGM3O95394 542 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 BCHEP06276 602 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 ITGA5P08648 1049 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 SLC18A1P54219 525 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 LGALS3BPQ08380 585 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 BNIP2Q12982 314 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 ZNF672Q499Z4 452 aaPredicted RBP11.56□□□□□ -0.56
DDX41-204ENST00000504807 NXNQ6DKJ4 435 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 SLC2A7Q6PXP3 512 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 B3GLCTQ6Y288 498 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 GALNT5Q7Z7M9 940 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 ZIC4Q8N9L1 334 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 SLC25A43Q8WUT9 341 aaPredicted RBP11.56□□□□□ -0.56
DDX41-204ENST00000504807 SLC38A5Q8WUX1 472 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 WDR60Q8WVS4 1066 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 HSD17B8Q92506 261 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 EBF4Q9BQW3 602 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 HDHD5Q9BXW7 423 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 PAIP1Q9H074 479 aaKnown RBP11.56□□□□□ -0.56
DDX41-204ENST00000504807 SLCO1B3Q9NPD5 702 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 SLC52A3Q9NQ40 469 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 SERINC1Q9NRX5 453 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 SLC25A37Q9NYZ2 338 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 SLAMF8Q9P0V8 285 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 USF3Q68DE3 2245 aa11.56□□□□□ -0.56
DDX41-204ENST00000504807 TRPC5OSA6NMA1 111 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 RFXANKO14593 260 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 FRS3O43559 492 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 CD5LO43866 347 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 SLC22A3O75751 556 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 NR2F1P10589 423 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 P2RY4P51582 365 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 SLC16A1P53985 500 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 OR2B6P58173 313 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 HOXC5Q00444 222 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 PDK3Q15120 406 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 PPA1Q15181 289 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 C9orf135Q5VTT2 229 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 FBXW9Q5XUX1 488 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 EPGNQ6UW88 154 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 FUNDC1Q8IVP5 155 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 TMEM171Q8WVE6 324 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 OIT3Q8WWZ8 545 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms