RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 MOKQ9UQ07 419 aa14.04□□□□□ -0.16
MUC1-220ENST00000498431 COPEO14579 308 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 RGS16O15492 202 aaPredicted RBP14.03□□□□□ -0.16
MUC1-220ENST00000498431 STX11O75558 287 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 FGF4P08620 206 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 BMP4P12644 408 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 CCNA2P20248 432 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 MATN1P21941 496 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 MAPK1P28482 360 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 RYKP34925 604 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 PGM1P36871 562 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 APOBEC1P41238 236 aaKnown RBP14.03□□□□□ -0.16
MUC1-220ENST00000498431 OR2B6P58173 313 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 H3F3AP84243 136 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 CARTPTQ16568 116 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 ARHGAP11BQ3KRB8 267 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 TSPO2Q5TGU0 170 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 EIF3MQ7L2H7 374 aaKnown RBP14.03□□□□□ -0.16
MUC1-220ENST00000498431 C6orf120Q7Z4R8 191 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 ADGRG3Q86Y34 549 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 RIMKLAQ8IXN7 391 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 CLECL1Q8IZS7 167 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 C4orf33Q8N1A6 199 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 MOAP1Q96BY2 351 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 PPP3R2Q96LZ3 170 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 TRMOQ9BU70 441 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 VIPAS39Q9H9C1 493 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 ATAD3AQ9NVI7 634 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 DCTN4Q9UJW0 460 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 FLVCR1Q9Y5Y0 555 aa14.03□□□□□ -0.16
MUC1-220ENST00000498431 CLDN24A6NM45 220 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 KIAA0513O60268 411 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 TRIM13O60858 407 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 TGFAP01135 160 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 C6orf136Q5SQH8 315 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 IL23RQ5VWK5 629 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 C1orf162Q8NEQ5 155 aaPredicted RBP14.02□□□□□ -0.17
MUC1-220ENST00000498431 ZNF563Q8TA94 476 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 ZG16BQ96DA0 208 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 DUSP26Q9BV47 211 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 BHLHE41Q9C0J9 482 aaPredicted RBP14.02□□□□□ -0.17
MUC1-220ENST00000498431 UPB1Q9UBR1 384 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 AMDHD2Q9Y303 409 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 HDGFL3Q9Y3E1 203 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 SPIN1Q9Y657 262 aaPredicted RBP14.02□□□□□ -0.17
MUC1-220ENST00000498431 FKBP7Q9Y680 259 aa14.02□□□□□ -0.17
MUC1-220ENST00000498431 NDUFS8O00217 210 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 KLF11O14901 512 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 DNPH1O43598 174 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 LYPLA1O75608 230 aaPredicted RBP14.01□□□□□ -0.17
MUC1-220ENST00000498431 AK1P00568 194 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 MYZAPP0CAP1 466 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 IMPDH2P12268 514 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 KRT4P19013 534 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 HNF1AP20823 631 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 ALDH3A1P30838 453 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 ARRB2P32121 409 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 MAGEA8P43361 318 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 FUT5Q11128 374 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 CR1LQ2VPA4 569 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 HIKESHIQ53FT3 197 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 TYW3Q6IPR3 259 aaKnown RBP14.01□□□□□ -0.17
MUC1-220ENST00000498431 C16orf62Q7Z3J2 963 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 GRINAQ7Z429 371 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 C17orf78Q8N4C9 275 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 FNDC5Q8NAU1 212 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 SLC35G5Q96KT7 338 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 MECRQ9BV79 373 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 BPESC1Q9GZL8 116 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 OR51I1Q9H343 314 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 CENPHQ9H3R5 247 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 TMEM181Q9P2C4 612 aa14.01□□□□□ -0.17
MUC1-220ENST00000498431 MEGF8Q7Z7M0 2845 aa14□□□□□ -0.17
MUC1-220ENST00000498431 IGHV1-18A0A0C4DH31 117 aa14□□□□□ -0.17
MUC1-220ENST00000498431 RNF103-CHMP3A0A140T963 221 aa14□□□□□ -0.17
MUC1-220ENST00000498431 LOC390937A0A1W2PQ73 354 aa14□□□□□ -0.17
MUC1-220ENST00000498431 LRP5LA4QPB2 252 aa14□□□□□ -0.17
MUC1-220ENST00000498431 DUXAA6NLW8 204 aa14□□□□□ -0.17
MUC1-220ENST00000498431 AP3D1O14617 1153 aa14□□□□□ -0.17
MUC1-220ENST00000498431 ANKRD28O15084 1053 aa14□□□□□ -0.17
MUC1-220ENST00000498431 PGRP06401 933 aa14□□□□□ -0.17
MUC1-220ENST00000498431 OR12D1P0DN82 309 aa14□□□□□ -0.17
MUC1-220ENST00000498431 CDH2P19022 906 aaPredicted RBP14□□□□□ -0.17
MUC1-220ENST00000498431 PRPS1L1P21108 318 aa14□□□□□ -0.17
MUC1-220ENST00000498431 SLC17A1Q14916 467 aa14□□□□□ -0.17
MUC1-220ENST00000498431 PGS1Q32NB8 556 aa14□□□□□ -0.17
MUC1-220ENST00000498431 IQCCQ4KMZ1 466 aa14□□□□□ -0.17
MUC1-220ENST00000498431 ATP6AP1LQ52LC2 224 aa14□□□□□ -0.17
MUC1-220ENST00000498431 OR4F3Q6IEY1 312 aa14□□□□□ -0.17
MUC1-220ENST00000498431 BHLHB9Q6PI77 547 aa14□□□□□ -0.17
MUC1-220ENST00000498431 ZCCHC23Q6ZST2 131 aa14□□□□□ -0.17
MUC1-220ENST00000498431 NATD1Q8N6N6 113 aa14□□□□□ -0.17
MUC1-220ENST00000498431 RAB8BQ92930 207 aa14□□□□□ -0.17
MUC1-220ENST00000498431 PKNOX2Q96KN3 472 aa14□□□□□ -0.17
MUC1-220ENST00000498431 PRPF18Q99633 342 aaKnown RBP14□□□□□ -0.17
MUC1-220ENST00000498431 VRK1Q99986 396 aaPredicted RBP14□□□□□ -0.17
MUC1-220ENST00000498431 SLC35A3Q9Y2D2 325 aa14□□□□□ -0.17
MUC1-220ENST00000498431 SLC9A8Q9Y2E8 581 aa14□□□□□ -0.17
MUC1-220ENST00000498431 TMEM72A0PK05 275 aa13.99□□□□□ -0.17
MUC1-220ENST00000498431 ZC3H12DA2A288 527 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms