RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ZNF716A6NP11 495 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 H7C417 338 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 KLF11O14901 512 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 SCN2BO60939 215 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 BCAS1O75363 584 aaPredicted RBP8.45□□□□□ -1.06
UBR4-216ENST00000494503 PMS2P2O95744 297 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 AGR2O95994 175 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 WNT11O96014 354 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 ITGA5P08648 1049 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 IGHV4-31P0DP07 118 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 APEHP13798 732 aaKnown RBP8.45□□□□□ -1.06
UBR4-216ENST00000494503 GZMKP49863 264 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 PDLIM4P50479 330 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 EFNA4P52798 201 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 PHC1P78364 1004 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 LSM11P83369 360 aaKnown RBP eCLIP8.45□□□□□ -1.06
UBR4-216ENST00000494503 GABRA6Q16445 453 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 MAPK14Q16539 360 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 ARHGAP11BQ3KRB8 267 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 KRTAP24-1Q3LI83 254 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 UGT3A2Q3SY77 523 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 XKR7Q5GH72 579 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 SPATA19Q7Z5L4 167 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 VPS37AQ8NEZ2 397 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 PSMA8Q8TAA3 256 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 TCP10LQ8TDR4 215 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 C10orf105Q8TEF2 133 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 ROPN1LQ96C74 230 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 COQ8BQ96D53 544 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 C19orf24Q9BVV8 132 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 CCDC106Q9BWC9 280 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 DPY30Q9C005 99 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 ZNF350Q9GZX5 532 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.45□□□□□ -1.06
UBR4-216ENST00000494503 PARPBPQ9NWS1 579 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 TMEM181Q9P2C4 612 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 MALT1Q9UDY8 824 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 ZDHHC2Q9UIJ5 367 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 MOKQ9UQ07 419 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 SLC9A8Q9Y2E8 581 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 AMDHD2Q9Y303 409 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 HDGFL3Q9Y3E1 203 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 TMED7-TICAM2A0A0A6YYA0 188 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 WDR91A4D1P6 747 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 ELOA3DA6NLF2 546 aaPredicted RBP8.44□□□□□ -1.06
UBR4-216ENST00000494503 F12P00748 615 aaPredicted RBP8.44□□□□□ -1.06
UBR4-216ENST00000494503 THBS1P07996 1170 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 UQCRBP14927 111 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 IGFBP5P24593 272 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 APOBEC3AP31941 199 aaPredicted RBP8.44□□□□□ -1.06
UBR4-216ENST00000494503 PGM1P36871 562 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 POLR2HP52434 150 aaKnown RBP8.44□□□□□ -1.06
UBR4-216ENST00000494503 NME5P56597 212 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 PRPS1P60891 318 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 UBE2NP61088 152 aaKnown RBP8.44□□□□□ -1.06
UBR4-216ENST00000494503 SLC35A1P78382 337 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 PDK3Q15120 406 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 OR7A5Q15622 319 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 ELOA3BQ3SY89 546 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 HIKESHIQ53FT3 197 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 OTUD3Q5T2D3 398 aaPredicted RBP8.44□□□□□ -1.06
UBR4-216ENST00000494503 TYW3Q6IPR3 259 aaKnown RBP8.44□□□□□ -1.06
UBR4-216ENST00000494503 EMBQ6PCB8 327 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 AAED1Q7RTV5 226 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 ANKS4BQ8N8V4 417 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 ELOA3Q8NG57 546 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 PROX1Q92786 737 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 SLC17A5Q9NRA2 495 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 SLC7A10Q9NS82 523 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 ADPRHL2Q9NX46 363 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 MARCOQ9UEW3 520 aaPredicted RBP8.44□□□□□ -1.06
UBR4-216ENST00000494503 TMED7Q9Y3B3 224 aa8.44□□□□□ -1.06
UBR4-216ENST00000494503 A0A096LNT2 108 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 TMEM72A0PK05 275 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 ETV2O00321 342 aaPredicted RBP8.43□□□□□ -1.06
UBR4-216ENST00000494503 RNASET2O00584 256 aaKnown RBP8.43□□□□□ -1.06
UBR4-216ENST00000494503 AP3D1O14617 1153 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 DNPH1O43598 174 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 EIF1BO60739 113 aaKnown RBP8.43□□□□□ -1.06
UBR4-216ENST00000494503 TGFAP01135 160 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 UQCRC2P22695 453 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 FKBP2P26885 142 aaKnown RBP8.43□□□□□ -1.06
UBR4-216ENST00000494503 TACR3P29371 465 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 NTF4P34130 210 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 HTR3AP46098 478 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 CLDN8P56748 225 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 KCNJ10P78508 379 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 SLC25A3Q00325 362 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 GNA13Q14344 377 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 FAM120AOSQ5T036 256 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 TSPO2Q5TGU0 170 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 ANXA8L1Q5VT79 327 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 TMEM225Q6GV28 225 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 FRRS1Q6ZNA5 592 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 ABHD12BQ7Z5M8 362 aaPredicted RBP8.43□□□□□ -1.06
UBR4-216ENST00000494503 ADGRG3Q86Y34 549 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 RIMKLAQ8IXN7 391 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 CADM2Q8N3J6 435 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 C17orf78Q8N4C9 275 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 PNPT1Q8TCS8 783 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms