RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 WIF1Q9Y5W5 379 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 TVP23AA6NH52 213 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 GPRIN2O60269 458 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 SPDEFO95238 335 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 CAV2P51636 162 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 CDKN3Q16667 212 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 ADAMTSL4Q6UY14 1074 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 ARL11Q969Q4 196 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 OR2M2Q96R28 347 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 HDAC8Q9BY41 377 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 NOX3Q9HBY0 568 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 PISDQ9UG56 409 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 CD300LBA8K4G0 201 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 DLSTP36957 453 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 OPRD1P41143 372 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 TATDN3Q17R31 274 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 LINC01465Q8N7H1 131 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 NPRL2Q8WTW4 380 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 PLCH1Q4KWH8 1693 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 S100A7P31151 101 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 MRPL2Q5T653 305 aaKnown RBP17.84■□□□□ 0.45
COL27A1-207ENST00000494090 SLC46A3Q7Z3Q1 461 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 ENTHD1Q8IYW4 607 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 MUCL1Q96DR8 90 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 A4GALTQ9NPC4 353 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 TJP1Q07157 1748 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 ZNF264O43296 627 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 SEC14L2O76054 403 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 MT-ND4P03905 459 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 F11P03951 625 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 CX3CR1P49238 355 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 FNDC9Q8TBE3 224 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 SENP5Q96HI0 755 aaPredicted RBP17.84■□□□□ 0.45
COL27A1-207ENST00000494090 EPHX3Q9H6B9 360 aa17.84■□□□□ 0.45
COL27A1-207ENST00000494090 SCRG1O75711 98 aa17.83■□□□□ 0.45
COL27A1-207ENST00000494090 PVRP15151 417 aa17.83■□□□□ 0.45
COL27A1-207ENST00000494090 JUNBP17275 347 aaPredicted RBP17.83■□□□□ 0.45
COL27A1-207ENST00000494090 MAOBP27338 520 aa17.83■□□□□ 0.45
COL27A1-207ENST00000494090 EEF1A2Q05639 463 aaKnown RBP17.83■□□□□ 0.45
COL27A1-207ENST00000494090 CLVS2Q5SYC1 327 aa17.83■□□□□ 0.45
COL27A1-207ENST00000494090 OR4K15Q8NH41 348 aa17.83■□□□□ 0.45
COL27A1-207ENST00000494090 ZFAND1Q8TCF1 268 aa17.83■□□□□ 0.45
COL27A1-207ENST00000494090 GON7Q9BXV9 100 aa17.83■□□□□ 0.45
COL27A1-207ENST00000494090 RHBDD3Q9Y3P4 386 aa17.83■□□□□ 0.45
COL27A1-207ENST00000494090 MYH9P35579 1960 aaKnown RBP17.83■□□□□ 0.45
COL27A1-207ENST00000494090 KLKB1P03952 638 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 MAOAP21397 527 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 IL32P24001 234 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 GPR18Q14330 331 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 MPEG1Q2M385 716 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 UBE2NLQ5JXB2 153 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 HHIPL1Q96JK4 782 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 FAM230AA0A1W2PPH8 454 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 CDHR4A6H8M9 788 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 MRPL33O75394 65 aaKnown RBP17.83■□□□□ 0.44
COL27A1-207ENST00000494090 TSPAN15O95858 294 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 REEP5Q00765 189 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 TUBB1Q9H4B7 451 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 ZNF281Q9Y2X9 895 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 HEMK1Q9Y5R4 338 aaPredicted RBP17.83■□□□□ 0.44
COL27A1-207ENST00000494090 NUDT21O43809 227 aaKnown RBP17.83■□□□□ 0.44
COL27A1-207ENST00000494090 ABOP16442 354 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 GPX2P18283 190 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 DLX5P56178 289 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 SHISA6Q6ZSJ9 500 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 CLDN22Q8N7P3 220 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 SIMC1Q8NDZ2 872 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 OR51Q1Q8NH59 317 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 NEURL3Q96EH8 262 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 GPR78Q96P69 363 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 TMEM38AQ9H6F2 299 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 CITO14578 2027 aa17.83■□□□□ 0.44
COL27A1-207ENST00000494090 PTPN6P29350 595 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 RPL23AP62750 156 aaKnown RBP17.82■□□□□ 0.44
COL27A1-207ENST00000494090 XKR7Q5GH72 579 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 PLCXD3Q63HM9 321 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 ZNF582Q96NG8 517 aaPredicted RBP17.82■□□□□ 0.44
COL27A1-207ENST00000494090 MS4A8Q9BY19 250 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 DYNLRB1Q9NP97 96 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 ASF1BQ9NVP2 202 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 LAMA4Q16363 1823 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 HOXD12P35452 270 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 SLC1A3P43003 542 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 CAV3P56539 151 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 RFLNAQ6ZTI6 216 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 MBOAT2Q6ZWT7 520 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 EDAQ92838 391 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 CNTNAP3BQ96NU0 1288 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 MARCH5Q9NX47 278 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 TMEM269A0A1B0GVZ9 245 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 METTL15A6NJ78 407 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 GPR137BO60478 399 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 SLCO2B1O94956 709 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 GAAP10253 952 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 ARNTP27540 789 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 MBTPS1Q14703 1052 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 TMEM207Q6UWW9 146 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 S100PBPQ96BU1 408 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 ST6GALNAC5Q9BVH7 336 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms