RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-218	ENST00000493430	P4HTM	Q9NXG6	502 aa		2.59	□□□□□ -1.99
PTCD3-218	ENST00000493430	EURL	Q9NYK6	297 aa		2.59	□□□□□ -1.99
PTCD3-218	ENST00000493430	NPAP1	Q9NZP6	1156 aa		2.59	□□□□□ -1.99
PTCD3-218	ENST00000493430	HACD3	Q9P035	362 aa		2.59	□□□□□ -1.99
PTCD3-218	ENST00000493430	AKAP7	Q9P0M2	348 aa	Predicted RBP	2.59	□□□□□ -1.99
PTCD3-218	ENST00000493430	SNX24	Q9Y343	169 aa		2.59	□□□□□ -1.99
PTCD3-218	ENST00000493430	CENPE	Q02224	2701 aa		2.59	□□□□□ -2
PTCD3-218	ENST00000493430	ITPR2	Q14571	2701 aa		2.59	□□□□□ -2
PTCD3-218	ENST00000493430	COL12A1	Q99715	3063 aa		2.59	□□□□□ -2
PTCD3-218	ENST00000493430	DOPEY1	Q5JWR5	2465 aa		2.59	□□□□□ -2
PTCD3-218	ENST00000493430	IGHV3OR16-10	A0A075B7F0	116 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	HEATR9	A2RTY3	570 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	RGSL1	A5PLK6	1076 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PINLYP	A6NC86	204 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	OR5K4	A6NMS3	321 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	WASHC1	A8K0Z3	465 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	C2orf74	A8MZ97	194 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	MIF4GD	A9UHW6	222 aa	Known RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	EPM2A	B3EWF7	344 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430		E7EQ34	232 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	C19orf84	I3L1E1	186 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	SAP18	O00422	153 aa	Known RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	RTCA	O00442	366 aa	Known RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PRMT5	O14744	637 aa	Predicted RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	RASGRF2	O14827	1237 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	RAD51C	O43502	376 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	AHCYL1	O43865	530 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	ZNF354A	O60765	605 aa	Predicted RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PTP4A3	O75365	173 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	TSPAN12	O95859	305 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	SLC16A8	O95907	504 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	EPO	P01588	193 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	IGHV3-13	P01766	116 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	KRTAP1-4	P0C5Y4	121 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	OR56A5	P0C7T3	313 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	COX6A1	P12074	109 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	VCL	P18206	1134 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	TSPAN8	P19075	237 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	IVD	P26440	423 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	SHMT2	P34897	504 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	ELK3	P41970	407 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	NSG1	P42857	185 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	MAGEA3	P43357	314 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	TNNT3	P45378	269 aa	Predicted RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	RAB28	P51157	221 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	CCR9	P51686	369 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	UCN	P55089	124 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	RAB8A	P61006	207 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	BTG2	P78543	158 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	KLC1	Q07866	573 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	ITIH4	Q14624	930 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	CRYM	Q14894	314 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	OR4D1	Q15615	310 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	TYSND1	Q2T9J0	566 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	NKAIN1	Q4KMZ8	207 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	ANKRD20A4	Q4UJ75	823 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	C1QTNF12	Q5T7M4	302 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	RNASEH2B	Q5TBB1	312 aa	Known RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	ARMC3	Q5W041	872 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	TMEM198	Q66K66	360 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	CRYBG3	Q68DQ2	2970 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	KIAA0930	Q6ICG6	404 aa	Predicted RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	CCDC137	Q6PK04	289 aa	Known RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	WASH2P	Q6VEQ5	465 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	KRT74	Q7RTS7	529 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	CMC1	Q7Z7K0	106 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	TMPRSS11B	Q86T26	416 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	KCNMB4	Q86W47	210 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PAQR7	Q86WK9	346 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	RPRML	Q8N4K4	120 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	MAPKAPK5-AS1	Q8N8E1	139 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	NAT8L	Q8N9F0	302 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	CCDC112	Q8NEF3	446 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	OR2L8	Q8NGY9	312 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	OR5K2	Q8NHB8	316 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	EEF1AKMT1	Q8WVE0	214 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	ANKRD49	Q8WVL7	239 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	APOBEC4	Q8WW27	367 aa	Known RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PSMF1	Q92530	271 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	NRGN	Q92686	78 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	ULK4	Q96C45	1275 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	SNRNP40	Q96DI7	357 aa	Known RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	CABS1	Q96KC9	395 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PRAP1	Q96NZ9	151 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	TAAR6	Q96RI8	345 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	VAT1	Q99536	393 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	SELENOS	Q9BQE4	189 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	UCK1	Q9HA47	277 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PDE7B	Q9NP56	450 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	A4GALT	Q9NPC4	353 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	CUTC	Q9NTM9	273 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	HAUS2	Q9NVX0	235 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	ANKMY1	Q9P2S6	941 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PPP1R3C	Q9UQK1	317 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PDE10A	Q9Y233	779 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	FARSA	Q9Y285	508 aa	Known RBP	2.58	□□□□□ -2
PTCD3-218	ENST00000493430	LIPG	Q9Y5X9	500 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	F8	P00451	2351 aa		2.58	□□□□□ -2
PTCD3-218	ENST00000493430	PDZD2	O15018	2839 aa		2.57	□□□□□ -2
PTCD3-218	ENST00000493430	PRSS51	A0A1B0GVH4	220 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms