RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SLC38A1Q9H2H9 487 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 RMND5AQ9H871 391 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 P2RX2Q9UBL9 471 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 UPB1Q9UBR1 384 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 MALT1Q9UDY8 824 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 SLC9A8Q9Y2E8 581 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 TMED7Q9Y3B3 224 aa11□□□□□ -0.65
COL6A1-205ENST00000492851 MAGED1Q9Y5V3 778 aaPredicted RBP11□□□□□ -0.65
COL6A1-205ENST00000492851 PRAMEF27A3QJZ7 478 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 SDHDO14521 159 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ABCD4O14678 606 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ANP32DO95626 131 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 TP53P04637 393 aaPredicted RBP10.99□□□□□ -0.65
COL6A1-205ENST00000492851 SOD3P08294 240 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ALDOCP09972 364 aaKnown RBP10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ZCCHC18P0CG32 403 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 CXCR1P25024 350 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 TACR3P29371 465 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 NME5P56597 212 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 FUT5Q11128 374 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 TNK1Q13470 666 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 VEZF1Q14119 521 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 PDCD4Q53EL6 469 aaKnown RBP10.99□□□□□ -0.65
COL6A1-205ENST00000492851 PAQR6Q6TCH4 344 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 SEZ6L2Q6UXD5 910 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 MSANTD1Q6ZTZ1 278 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 OLIG3Q7RTU3 272 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 C17orf78Q8N4C9 275 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ANKFN1Q8N957 763 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ANKRD42Q8N9B4 389 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 C1orf162Q8NEQ5 155 aaPredicted RBP10.99□□□□□ -0.65
COL6A1-205ENST00000492851 CNOT9Q92600 299 aaKnown RBP10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ARL5BQ96KC2 179 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 TEX37Q96LM6 180 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ADAD1Q96M93 576 aaKnown RBP10.99□□□□□ -0.65
COL6A1-205ENST00000492851 HS6ST2Q96MM7 605 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 SF3B5Q9BWJ5 86 aaKnown RBP10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ADAM19Q9H013 955 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 NKIRAS1Q9NYS0 192 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 ZIM2Q9NZV7 527 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 DCTN4Q9UJW0 460 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 OSGIN1Q9UJX0 560 aa10.99□□□□□ -0.65
COL6A1-205ENST00000492851 RAI1Q7Z5J4 1906 aaPredicted RBP10.99□□□□□ -0.65
COL6A1-205ENST00000492851 A0A096LPI6 279 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 TMEM120BA0PK00 339 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 CLDN24A6NM45 220 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 SNNO75324 88 aaPredicted RBP10.98□□□□□ -0.65
COL6A1-205ENST00000492851 VAMP5O95183 116 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 GSNP06396 782 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 GPIP06744 558 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 CHRM4P08173 479 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 CCNA2P20248 432 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 RPS4Y1P22090 263 aaKnown RBP10.98□□□□□ -0.65
COL6A1-205ENST00000492851 PCSK6P29122 969 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 EPHA3P29320 983 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 CRISP3P54108 245 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 DSCR9P59020 149 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 FAPQ12884 760 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 LARS2Q15031 903 aaKnown RBP10.98□□□□□ -0.65
COL6A1-205ENST00000492851 GABRA6Q16445 453 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 PGGHGQ32M88 737 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 LIN52Q52LA3 116 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 NXNQ6DKJ4 435 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 WBP2NLQ6ICG8 309 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 ABHD12BQ7Z5M8 362 aaPredicted RBP10.98□□□□□ -0.65
COL6A1-205ENST00000492851 DTX2Q86UW9 622 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 CCDC103Q8IW40 242 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 KBTBD8Q8NFY9 601 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 ITCHQ96J02 903 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 INPP5KQ9BT40 448 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 TRAF4Q9BUZ4 470 aaPredicted RBP10.98□□□□□ -0.65
COL6A1-205ENST00000492851 OR11A1Q9GZK7 315 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 WDR55Q9H6Y2 383 aaPredicted RBP10.98□□□□□ -0.65
COL6A1-205ENST00000492851 MANSC1Q9H8J5 431 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 POU2F3Q9UKI9 436 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 IFT52Q9Y366 437 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 ABCA2Q9BZC7 2435 aa10.98□□□□□ -0.65
COL6A1-205ENST00000492851 A0A0G2JPF8 293 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 TMEM72A0PK05 275 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 CDHR4A6H8M9 788 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 OR6C65A6NJZ3 312 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 HNRNPCL2B2RXH8 293 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 SHISA9B4DS77 424 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 HNRNPCL3B7ZW38 293 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 AP3D1O14617 1153 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 HNRNPCL1O60812 293 aaKnown RBP10.97□□□□□ -0.65
COL6A1-205ENST00000492851 BCAS1O75363 584 aaPredicted RBP10.97□□□□□ -0.65
COL6A1-205ENST00000492851 ERLIN1O75477 346 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 RAD51DO75771 328 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 THBS1P07996 1170 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 HNRNPCL4P0DMR1 293 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 CD40P25942 277 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 IL12AP29459 219 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 TTKP33981 857 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 CRATP43155 626 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 CDH11P55287 796 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 WDR4P57081 412 aaKnown RBP10.97□□□□□ -0.65
COL6A1-205ENST00000492851 EPS8Q12929 822 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 SLC17A1Q14916 467 aa10.97□□□□□ -0.65
COL6A1-205ENST00000492851 MRPL2Q5T653 305 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms