RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 ZNF350Q9GZX5 532 aa17.13■□□□□ 0.33
APTX-229ENST00000489583 SHARPINQ9H0F6 387 aa17.13■□□□□ 0.33
APTX-229ENST00000489583 MED4Q9NPJ6 270 aa17.13■□□□□ 0.33
APTX-229ENST00000489583 CTPS2Q9NRF8 586 aa17.13■□□□□ 0.33
APTX-229ENST00000489583 SLC9A8Q9Y2E8 581 aa17.13■□□□□ 0.33
APTX-229ENST00000489583 AMDHD2Q9Y303 409 aa17.13■□□□□ 0.33
APTX-229ENST00000489583 SONP18583 2426 aaKnown RBP17.12■□□□□ 0.33
APTX-229ENST00000489583 MXRA5Q9NR99 2828 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 GOLGA8QA0A0J9YX86 632 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 GOLGA8OA6NCC3 632 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 E7EQL1 145 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 GOLGA8NF8WBI6 632 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 SNUPNO95149 360 aaKnown RBP17.12■□□□□ 0.33
APTX-229ENST00000489583 WNT11O96014 354 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 SERPINE1P05121 402 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 THBS1P07996 1170 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 UQCRC2P22695 453 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 KHKP50053 298 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 SLC35A1P78382 337 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 IRX1P78414 480 aaPredicted RBP17.12■□□□□ 0.33
APTX-229ENST00000489583 LOXL1Q08397 574 aaPredicted RBP17.12■□□□□ 0.33
APTX-229ENST00000489583 CHI3L2Q15782 390 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 SMU1Q2TAY7 513 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 C1QTNF12Q5T7M4 302 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 OR4F3Q6IEY1 312 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 RIMKLAQ8IXN7 391 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 OR10H5Q8NGA6 315 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 TMEM181Q9P2C4 612 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 ZDHHC2Q9UIJ5 367 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 SLC25A15Q9Y619 301 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 FKBP7Q9Y680 259 aa17.12■□□□□ 0.33
APTX-229ENST00000489583 A0A1W2PR80 420 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 KIAA0513O60268 411 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 GPRIN2O60269 458 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 DNAJA2O60884 412 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 KRT33AO76009 404 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 CPSF4O95639 269 aaKnown RBP17.11■□□□□ 0.33
APTX-229ENST00000489583 OR12D1P0DN82 309 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 CCNA2P20248 432 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 VLDLRP98155 873 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 TNFAIP8L2Q6P589 184 aaPredicted RBP17.11■□□□□ 0.33
APTX-229ENST00000489583 ABHD12BQ7Z5M8 362 aaPredicted RBP17.11■□□□□ 0.33
APTX-229ENST00000489583 CLECL1Q8IZS7 167 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 C17orf78Q8N4C9 275 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 CCDC106Q9BWC9 280 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 C1QTNF6Q9BXI9 259 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 MALT1Q9UDY8 824 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 TRAPPC4Q9Y296 219 aa17.11■□□□□ 0.33
APTX-229ENST00000489583 PRSS51A0A1B0GVH4 220 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 ELOA3DA6NLF2 546 aaPredicted RBP17.1■□□□□ 0.33
APTX-229ENST00000489583 H7C417 338 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 PHF1O43189 567 aaPredicted RBP17.1■□□□□ 0.33
APTX-229ENST00000489583 GUSBP08236 651 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 HNF1AP20823 631 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 APOBEC3AP31941 199 aaPredicted RBP17.1■□□□□ 0.33
APTX-229ENST00000489583 IDH2P48735 452 aaKnown RBP17.1■□□□□ 0.33
APTX-229ENST00000489583 EFNA4P52798 201 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 WDR4P57081 412 aaKnown RBP17.1■□□□□ 0.33
APTX-229ENST00000489583 KCNJ10P78508 379 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 ELOA3BQ3SY89 546 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 ATG16L1Q676U5 607 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 PHC2Q8IXK0 858 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 KIRREL3Q8IZU9 778 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 CLEC4FQ8N1N0 589 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 ZNF525Q8N782 197 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 TRIML2Q8N7C3 387 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 ELOA3Q8NG57 546 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 OR8J2Q8NGG1 315 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 MIPOL1Q8TD10 442 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 DYDC1Q8WWB3 177 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 PROX1Q92786 737 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 ROPN1LQ96C74 230 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 DNAJA3Q96EY1 480 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 MUS81Q96NY9 551 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 MANSC1Q9H8J5 431 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 EXOSC3Q9NQT5 275 aaKnown RBP17.1■□□□□ 0.33
APTX-229ENST00000489583 TMEM160Q9NX00 188 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 DCTN4Q9UJW0 460 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 PRR14LQ5THK1 2151 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 ABCA1O95477 2261 aa17.1■□□□□ 0.33
APTX-229ENST00000489583 ZNF716A6NP11 495 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 USF1P22415 310 aaPredicted RBP17.09■□□□□ 0.33
APTX-229ENST00000489583 EDNRAP25101 427 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 PGM1P36871 562 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 POLR2HP52434 150 aaKnown RBP17.09■□□□□ 0.33
APTX-229ENST00000489583 MAP2K6P52564 334 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 SLC16A1P53985 500 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 CLNS1AP54105 237 aaKnown RBP17.09■□□□□ 0.33
APTX-229ENST00000489583 PRPS1P60891 318 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 STX3Q13277 289 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 PDCD2Q16342 344 aaPredicted RBP17.09■□□□□ 0.33
APTX-229ENST00000489583 GABRA6Q16445 453 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 DPY19L1Q2PZI1 675 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 C9orf135Q5VTT2 229 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 C11orf71Q6IPW1 123 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 CCDC103Q8IW40 242 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 C1orf162Q8NEQ5 155 aaPredicted RBP17.09■□□□□ 0.33
APTX-229ENST00000489583 HTRA1Q92743 480 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 ZNF524Q96C55 264 aa17.09■□□□□ 0.33
APTX-229ENST00000489583 ARL5BQ96KC2 179 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms