RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 OR52L1Q8NGH7 329 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 UBE2FQ969M7 185 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 SAMD8Q96LT4 415 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 JSRP1Q96MG2 331 aaPredicted RBP19.62■□□□□ 0.73
SMC4-221ENST00000489573 ZNF226Q9NYT6 803 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 CPAMD8Q8IZJ3 1885 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 TRAV36DV7A0A075B6V5 113 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 TRAV27A0A087WT01 109 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 A0A087WZY1 265 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 A8MVM7 634 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 MPZL2O60487 215 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 PTP4A3O75365 173 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 WDPCPO95876 746 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 FXYD6P3P58550 94 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 TOP3AQ13472 1001 aaPredicted RBP19.61■□□□□ 0.73
SMC4-221ENST00000489573 ZNF74Q16587 644 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 ZBED5Q49AG3 693 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 RBM48Q5RL73 367 aaKnown RBP19.61■□□□□ 0.73
SMC4-221ENST00000489573 LAIR2Q6ISS4 152 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 SMARCD3Q6STE5 483 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 C5orf46Q6UWT4 87 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 C10orf53Q8N6V4 93 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 OR51A7Q8NH64 312 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 STK35Q8TDR2 534 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 KTI12Q96EK9 354 aaPredicted RBP19.61■□□□□ 0.73
SMC4-221ENST00000489573 NPAS1Q99742 590 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 ADNPQ9H2P0 1102 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 AASSQ9UDR5 926 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 CHRNA9Q9UGM1 479 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 SCOCQ9UIL1 159 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 MSRB2Q9Y3D2 182 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 ZNF337Q9Y3M9 751 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 A0A0G2JMM0 328 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 A0A1W2PPB8 328 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 A0A1W2PRS3 328 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 KIR3DP1A8MWS1 328 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 LRRN3E7EW58 273 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 M0R129 80 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 KLK10O43240 276 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 TLX3O43711 291 aaPredicted RBP19.61■□□□□ 0.73
SMC4-221ENST00000489573 NPIPB7O75200 414 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 NEURL1O76050 574 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 BMP7P18075 431 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 TEKQ02763 1124 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 OR1C1Q15619 314 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 SPINK14Q6IE38 97 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 ACSM5Q6NUN0 579 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 OR2T33Q8NG76 320 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 RHOXF1Q8NHV9 184 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 APH1BQ8WW43 257 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 LIPHQ8WWY8 451 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 SIGLEC12Q96PQ1 595 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 TEX12Q9BXU0 123 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 PRRG3Q9BZD7 231 aa19.61■□□□□ 0.73
SMC4-221ENST00000489573 ZC3H12DA2A288 527 aaKnown RBP19.6■□□□□ 0.73
SMC4-221ENST00000489573 SMNDC1O75940 238 aaKnown RBP eCLIP19.6■□□□□ 0.732e-16■■■■■ 67.6
SMC4-221ENST00000489573 GABRB1P18505 474 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 CNR1P21554 472 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 EIF1P41567 113 aaKnown RBP19.6■□□□□ 0.73
SMC4-221ENST00000489573 DSCR4P56555 118 aaPredicted RBP19.6■□□□□ 0.73
SMC4-221ENST00000489573 FOXK2Q01167 660 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 MFAP5Q13361 173 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 PGGHGQ32M88 737 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 PTCHD4Q6ZW05 846 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 SLC43A2Q8N370 569 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 LRRC17Q8N6Y2 441 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 OR4Q3Q8NH05 313 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 POC1BQ8TC44 478 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 TRUB1Q8WWH5 349 aaKnown RBP19.6■□□□□ 0.73
SMC4-221ENST00000489573 TAAR8Q969N4 342 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 ZBTB8AQ96BR9 441 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 GNRHR2Q96P88 292 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 TNFRSF13CQ96RJ3 184 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 MCCC2Q9HCC0 563 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 NANSQ9NR45 359 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 TVP23BQ9NYZ1 205 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 PLA2G3Q9NZ20 509 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 IL20RAQ9UHF4 553 aa19.6■□□□□ 0.73
SMC4-221ENST00000489573 PCNX3Q9H6A9 2034 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 SHISA8B8ZZ34 492 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 SLC1A7O00341 560 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 ZNF208O43345 1280 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 WBP4O75554 376 aaKnown RBP19.59■□□□□ 0.73
SMC4-221ENST00000489573 CBR3O75828 277 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 DPP4P27487 766 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 FMO3P31513 532 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 RPS5P46782 204 aaKnown RBP19.59■□□□□ 0.73
SMC4-221ENST00000489573 MAP2K6P52564 334 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 CXCR4P61073 352 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 FHL1Q13642 323 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 DEFB109BQ30KR1 87 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 C1orf140Q5VVS0 124 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 TMEM154Q6P9G4 183 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 SNIP1Q8TAD8 396 aaKnown RBP19.59■□□□□ 0.73
SMC4-221ENST00000489573 ZNF566Q969W8 418 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 MOGAT1Q96PD6 335 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 SLC38A2Q96QD8 506 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 POLDIP3Q9BY77 421 aaKnown RBP19.59■□□□□ 0.73
SMC4-221ENST00000489573 RNF32Q9H0A6 362 aa19.59■□□□□ 0.73
SMC4-221ENST00000489573 UBQLN3Q9H347 655 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms